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Taxonomy browser (Lysobacter enzymogenes)

Lysobacter enzymogenes

Taxonomy ID: 69 (for references in articles please use NCBI:txid69)
current name
Lysobacter enzymogenes Christensen and Cook 1978 (Approved Lists 1980) emend. Lin et al. 2016, nom. approb. 1)
type strain of Lysobacter enzymogenes: ATCC:29487, DSM:2043, BCCM/LMG:8762, UASM:495
includes:
Lysobacter enzymogenes subsp. enzymogenes Christensen and Cook 1978
Lysobacter sp. Lj46
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 1,453 62
Protein 74,876 -
Structure 52 -
Genome 1 -
Popset 9 -
Conserved Domains 1 -
GEO Datasets 6 -
PubMed Central 341 -
Gene 4,922 -
SRA Experiments 60 -
Protein Clusters 1 -
Identical Protein Groups 42,583 -
BioProject 24 -
BioSample 72 1
Assembly 11 1
PubChem BioAssay 25 -
Taxonomy 1 -

Notes:

Comments and References:

Garrity GM et al. (2011)
Garrity, G.M., Labeda, D.P., and Oren, A. "Judicial Commission of the International Committee on Systematics of Prokaryotes. XIIth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 3, 4 and 6 August 2008, Istanbul, Turkey." Int. J. Syst. Evol. Microbiol. (2011) 61:2775-2780.
Lin SY et al. (2016)
Lin, S.-Y., Hameed, A., Shahina, M., Liu, Y.-C., Hsu, Y.-H., Wen, C.-Z., and Young, C.-C. "Description of Luteimonas pelagia sp. nov., isolated from marine sediment, and emended descriptions of Luteimonas aquatica, Luteimonas composti, Luteimonas mephitis, Lysobacter enzymogenes and Lysobacter panaciterrae." Int. J. Syst. Evol. Microbiol. (2016) 66:645-651.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Tindall BJ & Euzeby JP (2006)
Tindall, B.J., and Euzeby, J.P. "Lysobacter enzymogenes subsp. enzymogenes Christensen and Cook 1978, L. enzymogenes subsp. cookii Christensen 1978 and Streptococcus casseliflavus (Mundt and Graham 1968) Vaughan et al. 1978 should have been cited in the Approved Lists of Bacterial Names. Request for an opinion." Int. J. Syst. Evol. Microbiol. (2006) 56:2707-2709.
JUDICIAL OPINION 95 (2014)
Tindall, B.J. "The combinations Lysobacter enzymogenes subsp. enzymogenes Christensen and Cook 1978, L. enzymogenes subsp. cookii Christensen 1978 and Streptococcus casseliflavus (Mundt and Graham 1968) Vaughan et al. 1979 were in accordance with the International Code of Nomenclature of Bacteria at the time of publication in the International Journal of Systematic Bacteriology, but are not to be considered to be included on the Approved Lists of Bacterial Names. Opinion 95: Judicial Commission of the International Committee on Systematics of Prokaryotes." Int. J. Syst. Evol. Microbiol. (2014) 64:3920-3921.
Christensen P & Cook FD (1978)
Christensen, P., and Cook, F.D. "Lysobacter, a new genus of nonfruiting, gliding bacteria with a high base ratio." Int. J. Syst. Bacteriol. (1978) 28:367-393. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lysobacter enzymogenes meta-databases BacDive
4 records from this provider organism-specific BioCyc
GOLD: Go0032796 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lysobacter enzymogenes culture/stock collections Global Catalogue of Microorganisms
5 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
1-T-1-4 [1] 1.1.4 [2 1] 3.1T8 [7 1] 521 [1 1 674 1 1]
AFS070623 [1] ATCC 29487 [1 1 53 2 5029] ATCC29487 strain ATCC 29487 [1 1 53 2 5029] B25 [1 2 2 5101 1]
BB14 [1] BN3-15 [1] C3 [1 10 5565] CE710 [1]
CEMTC_5099 [1] CQ18 [1] CX03 [1 1 2 4957 1] CX06 [1 1 2 5059 1]
DSM 2043 [6 4] DSM 2043T [1] EECC-70 [1 1] Geo-O3-400 [1 1]
Geo-O3-426 [1 1] Geo-O3-429 [1 1] HTB3 [1 1] HX-9 [1]
IRP21 [1] JCK-1421 [1] K12CqR2AP005 [1] KW8 [1]
L4S1 [1] LE16 [1] LE429 [1 1] LJ6-4 [1]
LMG 8762 [2 1] LY3 [1 1] M497-1 [1 2 2 4891 2] N4-7 [4 4]
OH11 [2 29 5 359 4900 27] OH11GL001518 [1 1] P10 [2 2 2] P11 [1 1 1]
P13 [2 2 2] P14 [2 2 2] P16 [1 2 1] P17 [2 2 2]
P20 [2 2 2] P4 [2 2 2] P9 [2 2 2] PF100 [1 1]
PF47 [1 1] PF56 [1 1] PF67 [1 1] PF82 [1 1]
PF88 [1 1] SEMP3 [1 1] SR01 [2 8] SR50 [1]
T226 [2] YC013 [1] YC014 [1] YC36 [1 1 35 4663]
isolate
1011TES2B7 [1] 3.1T8 [4] L19 [1 1] L28 [1 1]
L29 [1 1] L30 [3 2] Le0908 [1 1] Le0989 [1 1]
Le1288 [1 1] Le1408 [1 1] Le1519 [1 1] Le1841 [1 1]
Le3180 [1 1] Le3316 [1 1] Le3432 [1 1] Le4215 [1 1]
Le4216 [1 1] Le4217 [1 1] Le4218 [1 1] Le4219 [1 1]
Le4220 [1 1] Le4221 [1 1] Le4222 [1 1] Le4223 [1 1]
Le4224 [1 1] Le4225 [1 1] Le4226 [1 1] Le4230 [1 1]
Le4232 [1 1] Le4235 [1 1] Le4236 [1 1] Le4238 [1 1]
Le4253 [1 1] Le4579 [1 1] Le4949 [1 1] ch3B10 [1]
nat-host
Poa pratensis [1] soil [16]
culture-collection
ATCC:29487 [2 2 2] DSM:2043 [6 4] NCCB:100553 [2 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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