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Taxonomy browser (Nitrospira sp.)

Nitrospira sp.

Taxonomy ID: 70125 (for references in articles please use NCBI:txid70125)
current name
Nitrospira sp.
NCBI BLAST name: bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira; unclassified Nitrospira
   Entrez records   
Database name Direct links
Nucleotide 4,278
Protein 88,980
Genome 1
SRA Experiments 39
Identical Protein Groups 550,317
BioProject 28
BioSample 504
Assembly 299
Taxonomy 1

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Nitrospira sp. meta-databases BacDive
2724679713: Nitrospira sp. QS2205 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
NIOT_A 130 [1] NIOT_A 8 [1]
isolate
128-326_metabat2_scaf2bin.035 [1 1] 1902S1bin.16 [1 1] 337R_metabinner_41 [1 1] 4_1_Jan_SF_Bin27 [1 1]
4_1_Jan_SF_Bin41 [1 1] 4_1_Jan_SF_Bin42 [1 1] 4_1_Jan_SF_Bin51 [1 1] 4_1_Jan_SF_Bin53 [1 1]
4_1_July_SF_Bin24 [1 1] 4_1_July_SF_Bin50 [1 1] 4_1_July_SF_Bin51 [1 1] 4_1_July_SF_Bin53 [1 1]
4_1_May_SF_Bin36 [1 1] 4_1_May_SF_Bin38 [1 1] 4_1_May_SF_Bin53 [1 1] 4_1_May_SF_Bin59 [1 1]
4_1_May_SF_Bin6 [1 1] 4_1_May_SF_Bin63 [1 1] 4_1_Oct_SF_Bin23 [1 1] 4_1_Oct_SF_Bin26 [1 1]
4_1_Oct_SF_Bin30 [1 1] 4_1_Oct_SF_Bin52 [1 1] 4_1_Oct_SF_Bin9 [1 1] 55_S69 [1 1]
8_1_July_SF_Bin45 [1 1] 8_1_July_SF_Bin71 [1 1] 8_1_May_SF_Bin16 [1 1] 8_1_Oct_SF_Bin26 [1 1]
8_1_Oct_SF_Bin54 [1 1] 8_1_Oct_SF_Bin63 [1 1] ACE_NIT1 [1 1] ACE_NIT10 [1 1]
ACE_NIT11 [1 1] ACE_NIT12 [1 1] ACE_NIT13 [1 1] ACE_NIT3 [1 1]
ACE_NIT4 [1 1] ACE_NIT5 [1 1] ACE_NIT6 [1 1] ACE_NIT7 [1 1]
ACE_NIT8 [1 1] ACE_NIT9 [1 1] AF21_PE0_T3_S1_59_35 [1 1] AMP-bin1 [1 1]
AMP-bin2 [1 1] APA_bin_24 [1 1] BS150m-G55 [1 1] BS150m-G56 [1 1]
Bin_21_1 [1 387] Bin_24_1 isolate Bin_24_1 [259] of Candidatus Troglogloeales bacterium Bin_29_1 [1 126] Bin_29_2_1 [1 118]
Bin_34_1 isolate Bin_34_1 [146] of Candidatus Troglogloeales bacterium Bin_49_2_2 [1 1] Bin_49_4 [1 1] Bin_54_10 [1 1]
Bin_6_1_1 isolate Bin_6_1_1 [237] of Candidatus Troglogloeales bacterium C13_k141_133576 [1] C13_k141_391495 [1] C18_metabat.bin.90 [1 1]
CO36405bin_1 [1 1] COM-LC224 [1 1] COS1_bin_7 [1 1] COS2_bin_3 [1 1]
COS4_bin_5 [1 1] CTRL-LIN-TMP-bin1 [1 1] CTRL-bin1 [1 1] C_No_T0_bin.34 [1 1]
C_No_T20_A_bin.15 [1 1] C_No_T20_B_bin.40 [1 1] C_No_T20_C_bin.15 [1 1] DGJ01_4_Bin137 [1 1]
DGJ02_3_Bin65 [1 1] DH1 [1 2 4128] DJ [1 1] E6_concoct.bin.127 [1 1]
EFPC_84 [1 1] EsbE_18-Q3-R3-47_BAT3C.226 [1 1] EsbW_18-Q3-R4-48_MAXAC.012 [1 1] GL140_5_metabat_222_sub [1 1]
GL140_6_metabat_96_sub [1 1] GRE_CMX_1 [1 1] GRE_NOB_1 [1 1] GRE_NOB_2 [1 1]
GW-Mx41s [1 1] GZL_HY_2_bin.42 [1 1] GZL_ISSM_2_bin.53 [1 1] Go_Eff_bin_173 [1 1]
Go_Eff_bin_299 [1 1] Go_SlAct_bin_31 [1 1] Go_SlAct_bin_355 [1 1] Go_SlAct_bin_422 [1 1]
Go_SlAct_bin_52 [1 1] Gw_Bodden_bin_138 [1 1] Gw_Eff_bin_145 [1 1] Gw_Inlet_bin_198 [1 1]
Gw_SlAct_bin_176 [1 1] Gw_SlPrim_bin_98 [1 1] H3_NOB1 [1 1 3853] HEB_FP_1_bin.25 [1 1]
HEB_ISSM_2_bin.26 [1 1] HKST-UBA02 [1 1] HKST-UBA03 [1 1] HKST-UBA04 [1 1]
HKST-UBA05 [1 1] HKST-UBA06 [1 1] HKST-UBA07 [1 1] HKST-UBA08 [1 1]
HKST-UBA09 [1 1] HKST-UBA10 [1 1] HTM.6 [1 1] Hade_18-Q3-R52-61_BAT3C.250 [1 1]
Hade_18-Q3-R52-61_MAXAC.023 [1 1] JAMMSM_CMX_1 [1 1] JAMMSM_CMX_2 [1 1] JAMMSM_NOB_1 [1 1]
JAMMSM_NOB_2 [1 1] JAMMSM_NOB_3 [1 1] JAMMSM_NOB_4 [1 1] JAMMSM_NOB_5 [1 1]
JAMMSM_NOB_6 [1 1] JAMMSM_NOB_7 [1 1] JZ-3_Bin7 [1 1] JZ-4_Bin17 [1 1]
JZ-4_Bin198 [1 1] JZ-4_Bin299 [1 1] KAN-bin1 [1 1] KAN-bin2 [1 1]
KAN-bin3 [1 1] K_DeepCast_150m_m2_200 [1 1] K_DeepCast_250m_m1_045 [1 1] K_DeepCast_300m_m2_067 [1 1]
K_Offshore_80m_m2_040 [1 1] K_Offshore_80m_m2_121 [1 1] Kalu_18-Q3-R12-55_MAXAC.132v2 [1 1] LS_FP_2_bin.31 [1 1]
Lyne_18-Q3-R50-59_BATAC.375 [1 1] M2_metabat2_scaf2bin.023 [1 1] MAG.311 [1 1] MAG.371 [1 1]
MAG_137 [1 411] MAG_149 [1 230] MAG_237 [1 49] MAG_242 [1 115]
MAG_245 [1 204] MAG_246 [1 99] MAG_248 [1 413] MAG_266 [1 79]
MAG_275 [1 55] MAG_423_bin-18 [1 1] MAG_79 [1 137] MC12_S10_M_CONCOCT_025 [1 1]
MC14_S12_M_CONCOCT_129 [1 1] MC17_S15_bin_99 [1 1] MC9_S7_M_Binsanity_088 [1 1] MGR_bin213 [1 1]
MGR_bin379 [1 1] M_DeepCast_200m_m2_046 [1 1] M_DeepCast_50m_m2_151 [1 1] M_DeepCast_65m_m2_155 [1 1]
M_DeepCast_65m_m2_186 [1 1] M_DeepCast_65m_mx_150 [1 1] MohnsGC08_bin011 [1 1] MohnsGC08_bin021 [1 1]
ND3_Bin_1_1 [1 1] NEU_CMX_1 [1 1] NEU_NOB_1 [1 1] NEU_NOB_2 [1 1]
NOB [1 83 3640] NOB-LC29 [1 1] NOB-LC32 [1 1] NSFW [1 2 4524]
OF_bin.2 [1 1] ON33M_5M_Binsanity_131 [1 1] OTE_1_metabat_233 [1 1] OTE_51_metabat_404 [1 1]
OTE_88_concoct_33_sub [1 1] OTE_8_metabat_151 [1 1] P-RSF-IL-20 [1 1] P-RSF-IL-22 [1 1]
PMV_3_maxbin.023_sub [1 1] QZM_B4_2_Bin429 [1 1] QZM_B4_3_Bin89 [1 1] RBC_COM1 [1 1]
RBC_COM2 [1 1] RBC_NOB1 [1 1] RBC_NOB2 [1 1] RBC_NOB3 [1 1]
RCA [1 86 3456] RCB [1 290 3711] RHO1_bin_24 [1 1] RHO2_bin_11 [1 1]
RHO3_bin_20 [1 1] RL_2_10 [1 1] RSF1 [1 28 3547] RSF11 [1 47 3160]
RSF12 [1 9 3415] RSF127 [1 83 2828] RSF13 [1 58 3324] RSF151 [1 492 2645]
RSF3 [1 25 3657] RSF48 [1 54 2508] RSF5 [1 36 3171] RSF6 [1 50 2948]
RSF7 [1 26 2469] RSF8 [1 82 1962] RSF9 [1 33 3611] Ribe_18-Q3-R11-54_BATAC.650 [1 1]
Ribe_18-Q3-R11-54_MAXAC.200 [1 1] Ru_enrich_NS [1 78] S009_maxbin2_scaf2bin.006 [1 1] S0bin14 [1 1]
S0bin1_add [1 1] S1bin.12 [1 1] S2bin.15 [1 1] S2bin.16 [1 1]
S2bin.17 [1 1] S2bin.6 [1 1] SJ32 [1 1] SJ521 [1 1]
SJ669 [1 1] SJ846 [1 1] SKYG58 [1 1] SOY_40_metabat_37 [1 1]
SOY_65_metabat_26 [1 1] SOY_6_C_metabat_146 [1 1] SRBZ-2_Bin184 [1 1] SRBZ-2_Bin320 [1 1]
SSF63 [1 1] STD1_85 [1 1] STY1_bin_3 [1 1] STY3_bin_3 [1 1]
SU08M_6M_Binsanity_100 [1 1] SU_4_4 [1 1] SZTDM-2_Bin289 [1 1] TGS_NIT1 [1 1]
TGS_NIT2 [1 1] TGS_NIT3 [1 1] TGS_NIT4 [1 1] TMP-bin2 [1 1]
TMP-bin3 [1 1] UBA10640 [1 1 1] UBA10644 [1 1 1] UBA11158 [1 1 1]
UBA11364 [1 1 1] UBA8978 [1 1 1] UBC1 [1 1 4341] UBC2 [1 1 4259]
UBC3 [1 1 3655] UWMA-0268 isolate UWMA-0268 [1] of Candidatus Manganitrophaceae bacterium UW_TS_NIT1_1 [1 1] VAR_39_metabat_253 [1 1]
VAR_43_metabat_111 [1 1] VAR_45_metabat_136 [1 1] VAR_48_metabat_381 [1 1] W63 [1 1]
WA-bin16 [1 1] WA-bin19 [1 1] WA-bin32 [1 1] WA-bin41 [1 1]
WB-IL-16 [1 1] WB-IL-20 [1 1] WC_33 [1 1] WS250 [1 1]
WS74 [1 1] YR-JJ [1 1] YR-LS [1 1] YR-PS [1 1]
YR-WHU [1 1] YR-XJB [1 1] YR-XLD [1 1] YR-XLJ-1 [1 1]
YR-XLJ-2 [1 1] YR-XLJ-3 [1 1] YR-ZJ [1 1] bin.260 [1 1]
bin_001 [1 1 5168] bin_003 [1 1 4317] bin_005 [1 1 4683] bin_009 [1 1]
bin_25 [1 1] bin_69_1 [1 1] bin_74 [1 1] bins.242 [1 1]
new MAG-285 [1 1] new MAG-286 [1 1] new MAG-287 [1 1] new MAG-288 [1 1]
new MAG-289 [1 1] nzgw277 [1 1] nzgw278 [1 1] nzgw279 [1 1]
palsa_1310 [1 1] palsa_1315 [1 1] sed-bin44 [1 1]
nat-host
Aplysina aerophoba [1] Coscinoderma mathewsi [5] Rhopaloeides odorabile [3] Stylissa flabelliformis [3]
Water [1]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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