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Taxonomy browser (Escherichia coli K-12)

Escherichia coli K-12

Taxonomy ID: 83333 (for references in articles please use NCBI:txid83333)
current name
Escherichia coli K-12
equivalent:
Escherichia coli K12
NCBI BLAST name: enterobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Host: bacteria|vertebrates
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
   Entrez records   
Database name Subtree links Direct links
Nucleotide 17,063 6,637
Protein 303,271 181,356
Structure 4,422 4,190
Genome 1 1
Popset 14 13
Conserved Domains 14 14
GEO Datasets 9,349 1,939
PubMed Central 149 -
Gene 26,245 317
SRA Experiments 21,674 4,006
GEO Profiles 98,042 67,418
Identical Protein Groups 49,378 24,679
BioProject 1,237 429
BioSample 19,003 3,796
Assembly 127 44
PubChem BioAssay 2,796 2,436
Taxonomy 39 1

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider supplemental materials Dryad Digital Repository
4 records from this provider organism-specific Genomes On Line Database
Escherichia coli K-12 culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
6 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
5.1 [1 128] 65 [1 48 212 5031 1] 66 [1 3 298 5122 1] 68 [1 54 222 4863 1]
69 [1 124 276 4971 1] 7.1 [1 133] 7.2 [1 136] 7.3 [1 125]
70 [1 60 270 4399 1] 71 [1 45 174 4467 1] 72 [1 48 196 4810 1] 73 [1 47 270 4882 1]
AAK_MD_15 [1] AAK_MD_3 [1] BW25113 [41 839 431 1 8 16768 1129] BZKR1G40 [1 2 4197]
BZKR2G40 [1 2 4201] BZKR3G40 [1 2 4201] C3 [1 4 1 128] C3026 [1 2 4729]
C600 [2 2] C73 [1 1 133] C76 [1 1 136] C84 [1 1 125]
CETR1G40 [1 2 4200] CETR2G40 [1 2 4200] CETR3G40 [1 2 4200] CT1061 [1 3]
Cel+ mutant J-M9-10 [1 1 1] Cel+ mutant J-M9-19 [1 1 1] Cel+ mutant J-M9-23 [1 1 1] Cel+ mutant J-MCP-01 [1 1 1]
Cel+ mutant J-MCP-03 [1 1 1] Cel+ mutant J-MCP-17 [1 1 1] Cel+ mutant MC-MCP-07 [1 1 1] Cel+ mutant MG-M9-19 [1 1 1]
Cel+ mutant MG-MCP-02 [1 1 1] Cel+ mutant MG-MCP-12 [1 1 1] DHB4 [1 2 4522] ER3413 [1 4051]
ER3435 [1 4447] ER3440 [1 4369] ER3445 [1 4363] ER3446 [1 4361]
ER3454 [1 4379] ER3466 [1 4419] ER3475 [1 4362] ER3476 [1 4358]
HO1 [1 1] HO2 [1 1] HO3 [1 1] HO4 [1 1]
HO9 [1 1] JE2571(RP4) [1] K-12 [124 13431 448 1 33007 6212 1 13 89273 16144 48] K-12 C600 [10 10]
K-12 substr. MG1655 [7 55 43 217 6 174] K12 strain K-12 [124 13431 448 1 33007 6212 1 13 89273 16144 48] MG1655 substrain MG1655 [3 12175 68 8 14320] of Escherichia coli str. K-12 substr. MG1655 MG1655 substrain BOP27 [39 39 1]
MG655 [1 2] SIEC017 [1 238 4746 1] SIEC033 [1 284 4531 1] SIEC034 [1 294 4520 1]
SIEC197 [1 234 4484 1] SO445 [1 1] SO446 [1 1] ZK126 [2 2]
substrain
5.1 [2] 7.1 [2] 7.2 [2] 7.3 [2]
AG100 [17] BW25113 [2 5 1] CR63 [1] DH10B [51 7 41]
GM4792 [2 4] MG1655 substrain MG1655 [3 12175 68 8 14320] of Escherichia coli str. K-12 substr. MG1655 W3110 [378 284]
serotype
Orough:H48 [2 2]
pathovar
commensal [2 2]
isolate
W3110 substrain W3110 [378 284] of Escherichia coli str. K-12 substr. W3110
nat-host
Homo sapiens [468]
culture-collection
CGSC:7636 [1 15 4136]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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