Taxonomy browser (Salmonella enterica subsp. enterica serovar Typhimurium)

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	472,326	314,591	1,123
Protein	6,471,853	3,986,128	-
Structure	1,146	621	-
Genome	1	1	-
Popset	184	184	-
Conserved Domains	11	5	-
GEO Datasets	5,208	3,042	-
PubMed Central	27,893	27,892	-
Gene	52,248	2,872	-
SRA Experiments	39,123	34,523	-
Identical Protein Groups	799,851	744,671	-
BioProject	1,013	668	-
BioSample	43,204	38,887	373
Assembly	29,277	27,803	6
PubChem BioAssay	4,711	4,645	-
Taxonomy	165	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Castellani A & Chalmers AJ (1919)

Castellani, A., and Chalmers, A.J. Manual of Tropical Medicine, 3rd ed. (1919). Williams Wood and Co., New York. [No PubMed abstract available.]

Chang HR et al. (1997)

Chang, H.R., Loo, L.H., Jeyaseelan, K., Earnest, L., and Stackebrandt, E. "Phylogenetic relationships of Salmonella typhi and Salmonella typhimurium based on 16S rRNA sequence analysis." Int. J. Syst. Bacteriol. (1997) 47:1253-1254.

Ezaki T et al. (2000)

Ezaki, T., Kawamura, Y., and Yabuuchi, E. "Recognition of nomenclatural standing of Salmonella typhi (Approved Lists 1980), Salmonella enteritidis (Approved Lists 1980) and Salmonella typhimurium (Approved Lists 1980), and conservation of the specific epithets enteritidis and typhimurium. Request for an opinion." Int. J. Syst. Evol. Microbiol. (2000) 50:945-947.

Lapage SP et al. (1992) (reference with type strain information)

Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International Code of Nomenclature of Bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992). [No PubMed record available.]

Loeffler F (1892)

Loeffler, F.: Zent. Bakteriol. Parasitenk. Infektionsk. Hyg. Abt. I. (1892) 11:129-141.

Skerman VBD et al. (1980) (Salmonella typhimurium)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Tindall BJ et al. (2005)

Tindall, B.J., Grimont, P.A.D., Garrity, G.M., and Euzeby, J.P. "Nomenclature and taxonomy of the genus Salmonella." Int. J. Syst. Evol. Microbiol. (2005) 55:521-524.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
48 records from this provider	organism-specific	BioCyc
64 records from this provider	organism-specific	Genomes On Line Database
Salmonella enterica subsp. enterica serovar typhimurium	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
118 records from this provider	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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