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Taxonomy browser (Mycobacteroides franklinii)

Mycobacteroides franklinii

Taxonomy ID: 948102 (for references in articles please use NCBI:txid948102)
current name
Mycobacteroides franklinii (Nogueira et al. 2015) Gupta et al. 2018
type strain of Mycobacteroides franklinii: personal::CV002, DSM:45524, ATCC:BAA-2149
homotypic synonym:
"Mycobacterium franklinii" Simmon et al. 2011, effective name 1)
Mycobacterium franklinii Nogueira et al. 2015 emend. Nouioui et al. 2018, emended name 2) in [Nouioui I et al. (2018c)]
Mycobacterium franklinii Nogueira et al. 2015
includes:
Mycobacterium sp. CV02
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacteroides
   Entrez records   
Database name Direct links Links from type
Nucleotide 690 311
Protein 59,167 -
Genome 1 -
Popset 2 -
PubMed Central 28 -
Gene 10,381 -
SRA Experiments 4 -
Protein Clusters 3 -
Identical Protein Groups 23,738 -
BioProject 4 -
BioSample 12 3
Assembly 12 3
Taxonomy 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Gupta RS et al. (2018)
Gupta, R.S., Lo, B., and Son, J. "Phylogenomics and comparative genomic studies robustly support division of the genus Mycobacterium into an emended genus Mycobacterium and four novel genera." Front. Microbiol. (2018) 9:67. [Corrigendum: Front. Microbiol. (2019) 10:714. (PMID 31024493)]
Nogueira CL et al. (2015)
Nogueira, C.L., Simmon, K.E., Chimara, E., Cnockaert, M., Palomino, J.C., Martin, A., Vandamme, P., Brown-Elliott, B.A., Wallace, R. Jr,, and Leao, S.C. "Mycobacterium franklinii sp. nov., a species closely related to members of the Mycobacterium chelonae-Mycobacterium abscessus group." Int. J. Syst. Evol. Microbiol. (2015) 65:2148-2153.
Simmon KE et al. (2011)
Simmon, K.E., Brown-Elliott, B.A., Ridge, P.E., Durtschi, J.D., Bridge Mann, L., Slechta, E.S., Steigerwalt, A.G., Moser, B.D., Whitney, A.M., Brown, J.M., Voelkerding, K.V., McGowan, K.L., Reilly, A.F., Kirn, T.J., Butler, W.R., Edelstein, P.H., Wallace, R.J. Jr., and Petti, C.A. "Mycobacterium chelonae-abscessus complex associated with sinopulmonary disease, Northeastern USA." Emerg. Infect. Dis. (2011) 17:1692-1700.
VALIDATION LIST No. 181 (2018)
Validation List No. 181: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68:1411-1417.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium franklinii meta-databases BacDive
Mycobacteroides franklinii CV002 organism-specific BioCyc
11 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium franklinii taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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