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Taxonomy browser (Callithrix jacchus)

Callithrix jacchus

Taxonomy ID: 9483 (for references in articles please use NCBI:txid9483)
current name
Callithrix jacchus
basionym:
Simia jacchus Linnaeus, 1758
homotypic synonym:
Callithrix jacchus jacchus
Genbank common name: white-tufted-ear marmoset
NCBI BLAST name: primates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
common name(s) common marmoset, white ear-tufted marmoset
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
   Entrez records   
Database name Direct links
Nucleotide 773,818
Protein 137,073
Structure 1
Genome 1
Popset 154
GEO Datasets 6,932
PubMed Central 3,429
Gene 67,293
SRA Experiments 11,732
Identical Protein Groups 95,493
BioProject 122
BioSample 13,114
Assembly 14
PubChem BioAssay 296
Taxonomy 1

Comments and References:

Mittermeier, R. A., A. B. Rylands, A. F. Coimbra-Filho, and G. A. B. da Foneseca (eds.). 1988. Ecology and behavior of Neotropical Primates. World Wildlife Fund, Washington D. C., 2:1-610.

Genome Information

Go to NCBI genomic BLAST page for Callithrix jacchus
Genome view: 24 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Callithrix jacchus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
Callithrix jacchus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Callithrix jacchus taxonomy/phylogenetic Barcodes of Life
Callithrix jacchus taxonomy/phylogenetic CalPhotos
CCR culture/stock collections Coriell Cell Repositories
dryaddb supplemental materials Dryad Digital Repository
Callithrix jacchus (Linnaeus, 1758) taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Callithrix jacchus (Linnaeus, 1758) taxonomy/phylogenetic Integrated Taxonomic Information System
Callithrix jacchus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
marmoset (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Primate Fact Sheets
Callithrix jacchus taxonomy/phylogenetic TreeBase
WebScipio: Callithrix jacchus organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
ATCC CRL 1773 [28] JP19 [1 1] JP59 [1 1] JP67 [1 1]
cj1700 [2 1 84 35]
isolate
#5336 [2 2] 0N3R [1 1 1] 0N4R [1 1 1] 112 [1 1]
131W [1 1] 17036 [1 1 1] 243 [2 2 2] 27 [1 1 1]
292 [1 1 1] 2N4R [1 1 1] 38R, 67R [1 1] 38R, 75N [1 1]
41R, 91V [1 1] 43 [1] 458 [1 1] 5336 [2 2]
5h5,b95,74e7 [1] 708 [1 1] 742 [1 1] 9314 [2 2]
9315 [1 1] 9328 [1 1] 9333 [1 1] 9347 [1 1]
9523 [1 1] Annabelle, Anorak [2 2] Avon, Earth [1 1] Avon, Enwor [2 2]
BJT100 [1 1 13] BJT157 [1 1 13] BJT165 [1 1 13] BJT166 [1 1 12]
BJT167 [1 1 13] BJT86 [1 1 13] BJT87 [1 1 13] C.j. 11 [1]
C.j. 9 [1] CAMP_cja [1 1 1] CJ-08-46 [1 1 1 1] CJ002A01 [1 1 1]
CJ005 [1 1] CJ006A02 [1 1 1] CJ008A03 [1 1 1] CJ023 [1 1]
CJ134 [1 1] CJ144 [1 1] CJ145 [1 1] CJ146 [1 1]
CJ147 [1 1] CJ148 [1 1] CJ149 [1 1] CJ151 [1 1]
CJ152 [1 1] CJ153 [1 1] CJ154 [1 1] CJ155 [1 1]
CJ156 [1 1] CJA [1 1 1] CJA-1 [51] CJA1 [1 1]
CJA2 [1 1] CJA3 [1 1] CJA33 [4 4] CJA43 [4 4]
CJAC [3] CajaG [1 1 1] Caljac34 [1 1] Cj [56 1]
Cja13 [1 1 1] Earth, Errant [2 2] Earth, m09122 [1 1] G104702 [25]
G2 [1 1] I1-34 [1 1 1] I1-39 [1 1 1] I1-40 [1 1 1]
I1-7 [1 1 1] I2-36 [1 1 1] I2075 [2] I3-20 [1 1 1]
I3-47 [1 1 1] I9-29 [1 1 1] IA2-09 [1 1 1] IA2-19 [1 1 1]
IA3-30 [1 1 1] IA4-25 [1 1 1] IA6-07 [1 1 1] IA6-11 [1 1 1]
IA7-01 [1 1 1] IA7-05 [1 1 1] IA9-26 [1 1 1] IB10-14 [1 1 1]
IB10-19 [1 1 1] IB6-30 [1 1 1] IB6-47 [1 1 1] IB7-30 [1 1 1]
IB7-31 [1 1 1] Javier [2 2] LIA [8 2 8] M04020 [1 1]
M04021 [2 2] M06024 [3 3] M09003 [2 2] M09089, M14009, M14015 [1 1]
M09113 [1 1] M09128 [1 1] M10003 [1 1] M10010 [1 1]
M10058, M12013 [1 1] M10067, M10068, M11068, M12022 [1 1] M10068, M10109, M11068, M12022 [1 1] M10109, M14005, M14015, M14032 [1 1]
M11068, M12013 [1 1] M11068, M14003 [1 1] M12022, M14006, M14017, M14032 [1 1] M13001 [2 2]
M13013 [1 1] M13024 [1 1] M13033 [1 1] M13039 [1 1]
M14005, M14006, M12022, M14014 [1 1] M14009, M14010, M12022, M12023 [2 2] M14009, M14010, M14036 [2 2] M14016, M14017 [1 1]
MJ50037 [1 1] MP40017 [1 1] MP40017, MJ50037 [1] Nasa [1 1]
Nis13 [1 1] Nis14 [1 1] Nis15 [1 1] Nis16 [1 1]
Nis17 [1 1] Nis18 [1 1] Nis21 [1 1] Nis22 [1 1]
Nis23 [1 1] Nis24 [1 1] Nis25 [1 1] Nw [1 1]
Ofra [2 2] PJ035 [1 1] PJ037 [1 1] PR00789.1 [1]
PR00789.10 [1] PR00789.100 [1] PR00789.101 [1] PR00789.102 [1]
PR00789.103 [1] PR00789.104 [1] PR00789.105 [1] PR00789.106 [1]
PR00789.107 [1] PR00789.108 [1] PR00789.109 [1] PR00789.11 [1]
PR00789.110 [1] PR00789.111 [1] PR00789.112 [1] PR00789.113 [1]
PR00789.114 [1] PR00789.115 [1] PR00789.116 [1] PR00789.117 [1]
PR00789.118 [1] PR00789.119 [1] PR00789.12 [1] PR00789.120 [1]
PR00789.121 [1] PR00789.122 [1] PR00789.123 [1] PR00789.124 [1]
PR00789.125 [1] PR00789.126 [1] PR00789.127 [1] PR00789.128 [1]
PR00789.129 [1] PR00789.13 [1] PR00789.130 [1] PR00789.131 [1]
PR00789.132 [1] PR00789.14 [1] PR00789.15 [1] PR00789.16 [1]
PR00789.17 [1] PR00789.18 [1] PR00789.19 [1] PR00789.2 [1]
PR00789.20 [1] PR00789.21 [1] PR00789.22 [1] PR00789.23 [1]
PR00789.24 [1] PR00789.25 [1] PR00789.26 [1] PR00789.27 [1]
PR00789.28 [1] PR00789.29 [1] PR00789.3 [1] PR00789.30 [1]
PR00789.31 [1] PR00789.32 [1] PR00789.33 [1] PR00789.34 [1]
PR00789.35 [1] PR00789.36 [1] PR00789.37 [1] PR00789.38 [1]
PR00789.39 [1] PR00789.4 [1] PR00789.40 [1] PR00789.41 [1]
PR00789.42 [1] PR00789.43 [1] PR00789.44 [1] PR00789.45 [1]
PR00789.46 [1] PR00789.47 [1] PR00789.48 [1] PR00789.49 [1]
PR00789.5 [1] PR00789.50 [1] PR00789.51 [1] PR00789.52 [1]
PR00789.53 [1] PR00789.54 [1] PR00789.55 [1] PR00789.56 [1]
PR00789.57 [1] PR00789.58 [1] PR00789.59 [1] PR00789.6 [1]
PR00789.60 [1] PR00789.61 [1] PR00789.62 [1] PR00789.63 [1]
PR00789.64 [1] PR00789.65 [1] PR00789.66 [1] PR00789.67 [1]
PR00789.68 [1] PR00789.69 [1] PR00789.7 [1] PR00789.70 [1]
PR00789.71 [1] PR00789.72 [1] PR00789.73 [1] PR00789.74 [1]
PR00789.75 [1] PR00789.76 [1] PR00789.77 [1] PR00789.78 [1]
PR00789.79 [1] PR00789.8 [1] PR00789.80 [1] PR00789.81 [1]
PR00789.82 [1] PR00789.83 [1] PR00789.84 [1] PR00789.85 [1]
PR00789.86 [1] PR00789.87 [1] PR00789.88 [1] PR00789.89 [1]
PR00789.9 [1] PR00789.90 [1] PR00789.91 [1] PR00789.92 [1]
PR00789.93 [1] PR00789.94 [1] PR00789.95 [1] PR00789.96 [1]
PR00789.97 [1] PR00789.98 [1] PR00789.99 [1] Rec19 [1 1]
Rec20 [1 1] SNPRC 17081; SNPRC 17065; SNPRC 17066 [1 10] SP122 [1 1 1] SP123 [1 1 1]
SP124 [1 1 1] SP125 [1 1 1] SP126 [1 1 1] SP127 [1 1 1]
SP128 [1 1 1] SP129 [1 1 1] SP95 [1 1 1] SP96 [1 1 1]
SP97 [1 1 1] SP98 [1 1 1] SP99 [1 1 1] T123 [1 13]
TYR_3_mar_1 [1 1] TYR_RT_1_mar_1 [1 1] Tap10 [1 1] Tap11 [1 1]
Tap4 [1 1] Tap5 [1 1] Tap6 [1 1] Tap7 [1 1]
Tap8 [1 1] Tap9 [1 1] V2 [1 1] YLE244 [3 3 2]
Zwin II Zsulda [1 1] alex [5 5] alkantana [3 3] animal Z2 [1 1]
annabelle [2 2] annabelle, avon [3 3] annabelle, m09122 [1 1] anorak [1 1]
ata29 [1 1 1] avon [4 4] bas [4 4] cees [3 3]
cj220-87 [2 2 2] cjNAT1 [1 1] cjPON1 [1 1] cjes001 [1 1]
eef [2 2] eldar [1 1] eldar, enwor [1 1] eldar, errant [1 1]
enwor [4 4] enwor, ergo [3 3] ergo [5 5] ergo, M14006 [1 1]
ergo, errant [1 1] ergo, m13024 [1 1] ergo, osinth [4 4] errant [2 2]
errant, osinth [1 1] flip [1 1] geert [4 4] hans [1 1]
henk [2 2] hunt58 [1 1 1] jan [1 1] joop [2 2]
klaas [2 2] koos [1 1] leen [1 1] m01 [2 2]
m01001, m10109, m14009, m14010 [1 1] m07 [2 2] m09089 [3 3] m10 [1 1]
m10018, m11032 [1 1] m10068 [3 3] m10115, m11032 [1 1] m11032 [1 1]
m12003 [2 2] m13 [2 2] m14 [1 1] m14006 [1 1]
m14019 [1 1] m14024 [3 3] m14045 [1 1] m15 [3 3]
m16 [1 1] m17 [2 2] m22 [2 2] m23 [3 3]
mCalJac1 [4 1 105413 82825] mi13552 [3 3] osinth [2 2] peter [2 2]
tata40 [1 1 1] toon [1 1]
common
common marmoset [3 2 3]
specimen-voucher
C2206_C._jacchus [1 1] C2207_C._jacchus [1 1] CJA001 [1 1] CJA002 [1 1]
CJA003 [1 1] CJA004 [1 1] CJA008 [1 1] CJA009 [1 1]
CJA011 [1 1] CJA014 [1 1] CJA018 [1 1] CJA020 [1 1]
CJA022 [1 1] CJA023 [1 1] CJA024 [1 1] CJA025 [1 1]
CJA026 [1 1] CJA029 [1 1] CJA032 [1 1] CJA033 [1 1]
CJA034 [1 1] CJA035 [1 1] CJA037 [1 1] CJA039 [1 1]
CJA040 [1 1] CJA041 [1 1] CJA067 [1 1] Dr. T. Haaf, MPI Molecular Genetics Berlin, Germany [1 1]
INPRIMAT CJA00376IN [3 3] MX90080 [5 4 4] PR00756 [1 1 1] ROM:101191 [1 1]
ROM:101192 [1 1]
breed
186/17066 [1 1 1 7] NEPRC [1 1 1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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