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Taxonomy browser (Borreliella afzelii PKo)

Borreliella afzelii PKo

Taxonomy ID: 390236 (for references in articles please use NCBI:txid390236)
current name
Borreliella afzelii PKo
NCBI BLAST name: spirochetes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Borrelia afzelii PKo
equivalent:
Borrelia afzelii str. PKo
Borrelia afzelii strain PKo
Lineage( full )
cellular organisms; Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella afzelii
   Entrez records   
Database name Direct links
Nucleotide 51
Protein 2,931
Genome 1
Popset 7
PubMed Central 4
Gene 2,833
Identical Protein Groups 1,731
BioProject 2
BioSample 2
Assembly 3
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Casjens SR et al. (2011b)
Casjens, S.R., Mongodin, E.F., Qiu, W.G., Dunn, J.J., Luft, B.J., Fraser-Liggett, C.M., and Schutzer, S.E. "Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates." J. Bacteriol. (2011) 193:6995-6996.
Glockner G et al. (2006)
Glockner, G., Schulte-Spechtel, U., Schilhabel, M., Felder, M., Suhnel, J., Wilske, B., and Platzer, M. "Comparative genome analysis: selection pressure on the Borrelia vls cassettes is essential for infectivity." BMC Genomics (2006) 7:211.

External Information Resources (NCBI LinkOut)

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2 records from this provider organism-specific BioCyc
GOLD: Go0000320 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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