txid10116[Organism:noexp] - Assembly

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Taxonomy

Rattus norvegicus

Norway rat (Rattus norvegicus) is a species of rodent in the family Muridae that is widely used as an experimental model organism.

Taxonomy ID: 10116

Genomes Genes Genome Data Viewer

Search results

Items: 14

Filters activated: Latest, Exclude anomalous. Clear all to show 22 items.

Select item 212089411.

GRCr8

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN/NHsdMcwi

Sex:: male

Submitter:: Genome Reference Consortium

Date:: 2024/01/31

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_036323735.1 (latest)

RefSeq assembly accession:: GCF_036323735.1 (latest)

IDs:: 21208941 [UID] 53372518 [GenBank] 53525908 [RefSeq]

Select item 118022312.

UTH_Rnor_SHRSP_BbbUtx_1.0

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: SHRSP/BbbUtx

Sex:: male

Submitter:: Inbred Rat Genome Sequencing Project (UTH/UK/UofL)

Date:: 2022/01/24

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_021556685.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 11802231 [UID] 31069348 [GenBank]

Select item 128374713.

UTH_Rnor_WKY_Bbb_1.0

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: WKY/Bbb RGD_1581635

Sex:: male

Submitter:: Inbred Rat Genome Sequencing Project (UTH/UK/UofL)

Date:: 2022/05/25

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_023515805.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 12837471 [UID] 33530128 [GenBank]

Select item 215768114.

ASM2351578v2

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: SHR/Utx RGD_8142385

Sex:: male

Submitter:: Inbred Rat Genome Sequencing Project (UTH/UK/UofL)

Date:: 2024/02/29

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_023515785.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 21576811 [UID] 54318718 [GenBank]

Select item 90791115.

mRatBN7.2

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN/NHsdMcwi

Sex:: male

Submitter:: Wellcome Sanger Institute

Date:: 2020/11/10

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_015227675.2 (latest)

RefSeq assembly accession:: GCF_015227675.2 (suppressed)

Release type:: Minor

Excluded from RefSeq:: superseded by newer assembly for species

IDs:: 9079111 [UID] 24462838 [GenBank] 24464048 [RefSeq]

Select item 1918716.

Rnor_6.0

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: mixed

Sex:: pooled males and females

Submitter:: Rat Genome Sequencing Consortium

Date:: 2014/07/01

Assembly level:: Chromosome

Genome representation:: full

Synonyms:: rn6

GenBank assembly accession:: GCA_000001895.4 (latest)

RefSeq assembly accession:: GCF_000001895.5 (suppressed)

Excluded from RefSeq:: superseded by newer assembly for species

IDs:: 191871 [UID] 1156538 [GenBank] 1174938 [RefSeq]

Select item 54487.

Rn_Celera

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN; Sprague-Dawley

Submitter:: Celera Genomics

Date:: 2006/12/06

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_000002265.1 (latest)

RefSeq assembly accession:: GCF_000002265.2 (suppressed)

Excluded from RefSeq:: superseded by newer assembly for species

IDs:: 5448 [UID] 280818 [GenBank] 5448 [RefSeq]

Select item 84216118.

mRatBN7.1 alternate haplotype

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN/NHsdMcwi

Sex:: male

Submitter:: Wellcome Sanger Institute

Date:: 2020/11/04

Assembly type:: alternate-pseudohaplotype (alternate pseudohaplotype of diploid)

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_015244455.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: genome length too small

IDs:: 8421611 [UID] 22926438 [GenBank]

Select item 2284189.

ASM18071v1

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: SHRSP/Bbb

Submitter:: STAR - a SNP and haplotype map for the rat

Date:: 2007/04/10

Assembly level:: Scaffold

Genome representation:: partial

GenBank assembly accession:: GCA_000180715.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 228418 [UID] 228418 [GenBank]

Select item 22849810.

ASM18079v1

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: WKY/Bbb

Submitter:: STAR - a SNP and haplotype map for the rat

Date:: 2007/04/10

Assembly level:: Scaffold

Genome representation:: partial

GenBank assembly accession:: GCA_000180795.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 228498 [UID] 228498 [GenBank]

Select item 22847811.

ASM18077v1

Organism:: Rattus norvegicus (Norway rat)

Submitter:: STAR - a SNP and haplotype map for the rat

Date:: 2007/04/10

Assembly level:: Contig

Genome representation:: partial

GenBank assembly accession:: GCA_000180775.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 228478 [UID] 228478 [GenBank]

Select item 22873812.

ASM18103v1

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: GK/Ox

Submitter:: STAR - a SNP and haplotype map for the rat

Date:: 2007/04/10

Assembly level:: Contig

Genome representation:: partial

GenBank assembly accession:: GCA_000181035.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 228738 [UID] 228738 [GenBank]

Select item 22871813.

ASM18101v1

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: SS/JrNhsd

Submitter:: STAR - a SNP and haplotype map for the rat

Date:: 2007/04/10

Assembly level:: Scaffold

Genome representation:: partial

GenBank assembly accession:: GCA_000181015.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 228718 [UID] 228718 [GenBank]

Select item 112290114.

rnor5.0_scrapheap

Organism:: Rattus norvegicus (Norway rat)

Submitter:: NKI

Date:: 2016/01/28

Assembly level:: Scaffold

Genome representation:: partial

GenBank assembly accession:: GCA_900014975.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: partial

IDs:: 1122901 [UID] 4561518 [GenBank]

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