txid1437010[Organism:exp] - Assembly

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Taxonomy

Boreoeutheria

Boreoeutheria is a classification of placental in the class Mammalia (mammals).

Taxonomy ID: 1437010

Taxonomy browser Genomes

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Items: 1 to 20 of 2664

Filters activated: Latest, Exclude anomalous. Clear all to show 3230 items.

Select item 119682111.

GRCh38.p14

Genome Reference Consortium Human Build 38 patch release 14 (GRCh38.p14)

Organism:: Homo sapiens (human)

Submitter:: Genome Reference Consortium

Date:: 2022/02/03

Assembly type:: haploid-with-alt-loci

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: reference genome

Synonyms:: hg38

GenBank assembly accession:: GCA_000001405.29 (latest)

RefSeq assembly accession:: GCF_000001405.40 (latest)

Release type:: Patch

IDs:: 11968211 [UID] 31457668 [GenBank] 31649238 [RefSeq]

Select item 73587412.

GRCm39

Genome Reference Consortium Mouse Build 39

Organism:: Mus musculus (house mouse)

Infraspecific name:: Strain: C57BL/6J

Submitter:: Genome Reference Consortium

Date:: 2020/06/24

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: reference genome

Synonyms:: mm39

GenBank assembly accession:: GCA_000001635.9 (latest)

RefSeq assembly accession:: GCF_000001635.27 (latest)

IDs:: 7358741 [UID] 20371618 [GenBank] 20412818 [RefSeq]

Select item 108724713.

NDDB_SH_1

Organism:: Bubalus bubalis (water buffalo)

Infraspecific name:: Breed: Murrah

Sex:: female

Submitter:: National Dairy Development Board, India

Date:: 2021/09/10

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_019923935.1 (latest)

RefSeq assembly accession:: GCF_019923935.1 (latest)

IDs:: 10872471 [UID] 28791618 [GenBank] 30093448 [RefSeq]

Select item 206324114.

NHGRI_mPanTro3-v2.0_pri

Organism:: Pan troglodytes (chimpanzee)

Sex:: male

Submitter:: National Human Genome Research Institute, National Institutes of Health

Date:: 2024/01/08

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_028858775.2 (latest)

RefSeq assembly accession:: GCF_028858775.2 (latest)

IDs:: 20632411 [UID] 52090828 [GenBank] 53522838 [RefSeq]

Select item 206370915.

NHGRI_mGorGor1-v2.0_pri

Organism:: Gorilla gorilla gorilla (western lowland gorilla)

Sex:: male

Submitter:: National Human Genome Research Institute, National Institutes of Health

Date:: 2024/01/08

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_029281585.2 (latest)

RefSeq assembly accession:: GCF_029281585.2 (latest)

IDs:: 20637091 [UID] 52099208 [GenBank] 53524528 [RefSeq]

Select item 206324316.

NHGRI_mPonPyg2-v2.0_pri

Organism:: Pongo pygmaeus (Bornean orangutan)

Sex:: male

Submitter:: National Human Genome Research Institute, National Institutes of Health

Date:: 2024/01/08

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_028885625.2 (latest)

RefSeq assembly accession:: GCF_028885625.2 (latest)

IDs:: 20632431 [UID] 52091098 [GenBank] 53520618 [RefSeq]

Select item 206070917.

NHGRI_mSymSyn1-v2.0_pri

Organism:: Symphalangus syndactylus (siamang)

Sex:: male

Submitter:: National Human Genome Research Institute, National Institutes of Health

Date:: 2024/01/05

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_028878055.2 (latest)

RefSeq assembly accession:: GCF_028878055.2 (latest)

IDs:: 20607091 [UID] 52035008 [GenBank] 53522778 [RefSeq]

Select item 129431618.

CAU_F1_paternal_1.0

Organism:: Ovis ammon polii x Ovis aries (even-toed ungulates)

Sex:: male

Submitter:: China Agricultural University

Date:: 2022/06/10

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_023701655.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 12943161 [UID] 33810898 [GenBank]

Select item 104530519.

mAcoKem2_REL_1905

Organism:: Acomys kempi (Kemp's spiny mouse)

Submitter:: WELLCOME TRUST SANGER INSTITUTE

Date:: 2021/07/06

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_907164505.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 10453051 [UID] 27758268 [GenBank]

Select item 2120894110.

GRCr8

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN/NHsdMcwi

Sex:: male

Submitter:: Genome Reference Consortium

Date:: 2024/01/31

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_036323735.1 (latest)

RefSeq assembly accession:: GCF_036323735.1 (latest)

IDs:: 21208941 [UID] 53372518 [GenBank] 53525908 [RefSeq]

Select item 100419111.

Sscrofa11.1

Sscrofa11 with Y sequences from WTSI_X_Y_pig V2

Organism:: Sus scrofa (pig)

Infraspecific name:: Breed: Duroc

Sex:: female

Submitter:: The Swine Genome Sequencing Consortium (SGSC)

Date:: 2017/02/07

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: susScr11

GenBank assembly accession:: GCA_000003025.6 (latest)

RefSeq assembly accession:: GCF_000003025.6 (latest)

IDs:: 1004191 [UID] 4121818 [GenBank] 4192498 [RefSeq]

Select item 1810719112.

ARS-UCD2.0

ARS-UCD2.0 assembly of the Hereford cattle breed with chrY from Wagyu contributed by UI/WSU

Organism:: Bos taurus (cattle)

Infraspecific name:: Breed: Hereford

Sex:: female

Submitter:: USDA ARS

Date:: 2023/07/01

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: bosTau9

GenBank assembly accession:: GCA_002263795.4 (latest)

RefSeq assembly accession:: GCF_002263795.3 (latest)

IDs:: 18107191 [UID] 46273238 [GenBank] 48124668 [RefSeq]

Select item 611949113.

UU_Cfam_GSD_1.0

Organism:: Canis lupus familiaris (dog)

Infraspecific name:: Breed: German Shepherd

Sex:: female

Submitter:: Uppsala University

Date:: 2020/03/10

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: canFam4

GenBank assembly accession:: GCA_011100685.1 (latest)

RefSeq assembly accession:: GCF_011100685.1 (latest)

IDs:: 6119491 [UID] 17410168 [GenBank] 20192338 [RefSeq]

Select item 806150114.

ASM325472v2

Organism:: Canis lupus dingo (dingo)

Sex:: female

Submitter:: James Cook University

Date:: 2020/09/11

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_003254725.2 (latest)

RefSeq assembly accession:: GCF_003254725.2 (latest)

IDs:: 8061501 [UID] 22055618 [GenBank] 33886048 [RefSeq]

Select item 234505115.

Mmul_10

Organism:: Macaca mulatta (Rhesus monkey)

Sex:: female

Submitter:: The Genome Institute at Washington University School of Medicine

Date:: 2019/02/13

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: rheMac10

GenBank assembly accession:: GCA_003339765.3 (latest)

RefSeq assembly accession:: GCF_003339765.1 (latest)

IDs:: 2345051 [UID] 8740558 [GenBank] 8775378 [RefSeq]

Select item 1810720116.

ARS-UI_Ramb_v3.0

ARS-UI_Ramb_v3.0 assembly of the Rambouillet sheep breed with chrY from Churro contributed by UI/USU

Organism:: Ovis aries (sheep)

Infraspecific name:: Breed: Rambouillet
Infraspecific name:: Strain: OAR_USU_Benz2616

Sex:: female

Submitter:: University of Idaho

Date:: 2023/07/20

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_016772045.2 (latest)

RefSeq assembly accession:: GCF_016772045.2 (latest)

IDs:: 18107201 [UID] 46273338 [GenBank] 48251678 [RefSeq]

Select item 1327994117.

ARS1.2

Old name: ASM170441v1

Organism:: Capra hircus (goat)

Infraspecific name:: Breed: San Clemente

Sex:: male

Submitter:: USDA ARS

Date:: 2016/08/24

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_001704415.2 (latest)

RefSeq assembly accession:: GCF_001704415.2 (latest)

Release type:: Minor

IDs:: 13279941 [UID] 34702798 [GenBank] 34702828 [RefSeq]

Select item 1145513118.

MFA1912RKSv2

Organism:: Macaca fascicularis (crab-eating macaque)

Submitter:: Keio University / RIKEN

Date:: 2021/10/26

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_012559485.3 (latest)

RefSeq assembly accession:: GCF_012559485.2 (latest)

IDs:: 11455131 [UID] 30152968 [GenBank] 30234828 [RefSeq]

Select item 922073119.

UM_NZW_1.0

Organism:: Oryctolagus cuniculus (rabbit)

Infraspecific name:: Breed: New Zealand White

Sex:: male

Submitter:: Shanghai Institutes for Biological Sciences

Date:: 2021/02/04

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_009806435.2 (latest)

RefSeq assembly accession:: GCF_009806435.1 (latest)

IDs:: 9220731 [UID] 24837048 [GenBank] 37120158 [RefSeq]

Select item 151201120.

EquCab3.0

Organism:: Equus caballus (horse)

Infraspecific name:: Breed: thoroughbred

Sex:: female

Submitter:: University of Louisville

Date:: 2018/01/05

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: equCab3

GenBank assembly accession:: GCA_002863925.1 (latest)

RefSeq assembly accession:: GCF_002863925.1 (latest)

IDs:: 1512011 [UID] 5843558 [GenBank] 5863628 [RefSeq]

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