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IMG-taxon 2654588147 annotated assembly

Organism name:
Anoxybacillus pushchinoensis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: K1
BioSample:
SAMN05216169
BioProject:
PRJEB17036
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/11/02
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900111795.1 (latest)
RefSeq assembly accession:
GCF_900111795.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FOJQ01
Genome coverage:
460x

IDs: 883791 [UID] 3707328 [GenBank] 4880628 [RefSeq]

See Genome Information for Anoxybacillus pushchinoensis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length2,625,421
Total ungapped length2,619,951
Gaps between scaffolds0
Number of scaffolds117
Scaffold N5045,737
Scaffold L5019
Number of contigs124
Contig N5040,724
Contig L5021
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)117

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,625,4211172,619,95145,73770

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Anoxybacillus pushchinoensisAnoxybacillus pushchinoensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_023653015.1Anoxybacillus kestanbolensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type87.3678.4775.87

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected