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UCB_Ppar_1.0

Organism name:
Pipa parva (Sabana Surinam toad)
Isolate:
BJE4294
Sex:
female
BioSample:
SAMN12075865
BioProject:
PRJNA588312
Submitter:
University of California, Berkeley
Date:
2021/08/17
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_019650415.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
WMED01
Assembly method:
Meraculous v. 2.2.5
Expected final version:
yes
Genome coverage:
15.0x
Sequencing technology:
Illumina HiSeq

IDs: 10728321 [UID] 28408638 [GenBank]

See Genome Information for Pipa parva

History (Show revision history)

Comment

Global statistics

Total sequence length1,370,893,480
Total ungapped length1,362,721,936
Gaps between scaffolds0
Number of scaffolds283,592
Scaffold N507,189
Scaffold L5055,283
Number of contigs349,777
Contig N506,215
Contig L5063,310
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)283,592

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,370,893,480283,5921,362,721,9367,18966,1850