U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM587008v1

Organism name:
Aquibacillus sediminis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: BH258
BioSample:
SAMN11518981
BioProject:
PRJNA539974
Submitter:
Institute of Microbial Ecology and Resources
Date:
2019/05/28
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_005870085.1 (latest)
RefSeq assembly accession:
GCF_005870085.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
SZNM01
Assembly method:
SPAdes v. 3.13.0 or April-2019
Expected final version:
yes
Genome coverage:
82.95x
Sequencing technology:
Illumina iSeq

IDs: 3208521 [UID] 10722748 [GenBank] 10746308 [RefSeq]

See Genome Information for Aquibacillus sediminis

History (Show revision history)

Comment

Bacteria and source DNA available from IMER

Global statistics

Total sequence length4,381,979
Total ungapped length4,381,979
Number of contigs85
Contig N50135,569
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)85

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,381,979854,381,979135,56900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Aquibacillus sediminisAquibacillus sediminis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003426025.1Paraliobacillus quinghaiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type84.011.431.90

ANI result

Taxonomy check statusBest match statusComment
OKlow-coverageAssembly is the type-strain, no match is expected