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ASM651758v1

Organism name:: Serratia sp. SRS-8-S-2018 (enterobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: SRS-8-S-2018
BioSample:: SAMN12107717
BioProject:: PRJNA550097
Submitter:: Florida A&M University
Date:: 2019/06/30
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_006517585.1 (latest)
RefSeq assembly accession:: GCF_006517585.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: VHNF01
Assembly method:: CLC genomics workbench v. 11.0.1
Expected final version:: yes
Genome coverage:: 104.0x
Sequencing technology:: Illumina NextSeq500

IDs: 3578681 [UID] 11571198 [GenBank] 11596888 [RefSeq]

See Genome Information for Serratia sp. SRS-8-S-2018

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_006517585.1	=	GCF_006517585.1	ASM651758v1	Contig	Latest GenBank, Latest RefSeq

Comment

Bacteria and source DNA available from Dr. Ashvini Chauhan, Florida A&M University
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::06/25/2019 14:26:47
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.8
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::5,164
CDSs (total)::5,097
Genes (coding)::5,012
CDSs (with protein)::5,012
Genes (RNA)::67
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::54
ncRNAs::10
Pseudo Genes (total)::85
CDSs (without protein)::85
Pseudo Genes (ambiguous residues)::0 of 85
Pseudo Genes (frameshifted)::27 of 85
Pseudo Genes (incomplete)::55 of 85
Pseudo Genes (internal stop)::22 of 85
Pseudo Genes (multiple problems)::19 of 85
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	5,323,630
Total ungapped length	5,323,630
Number of contigs	159
Contig N50	101,301
Contig L50	17
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	159

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	96.90	86.02	90.78

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ASM651758v1

See Genome Information for Serratia sp. SRS-8-S-2018

Pathogen Detection Resources

History (Show revision history)

Comment

Genome-Annotation-Data

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