txid282425[Organism:exp] - Assembly

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Taxonomy

Clupei

Clupei is a subcohort of bony fish in the class Actinopteri.

Taxonomy ID: 282425

Taxonomy browser Genomes

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Items: 1 to 20 of 34

Filters activated: Latest, Exclude anomalous. Clear all to show 43 items.

Select item 151980011.

ASM2747535v1

Organism:: Coilia nasus (Japanese grenadier anchovy)

Infraspecific name:: Ecotype: Yangtze River

Sex:: female

Submitter:: Nanjing Agricultural University

Date:: 2022/12/28

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_027475355.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 15198001 [UID] 39156498 [GenBank]

Select item 95877512.

Ch_v2.0.2

Organism:: Clupea harengus (Atlantic herring)

Submitter:: UPPSALA UNIVERISTY

Date:: 2019/04/16

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_900700415.2 (latest)

RefSeq assembly accession:: GCF_900700415.2 (latest)

IDs:: 9587751 [UID] 25682298 [GenBank] 28016748 [RefSeq]

Select item 101174313.

fAloSap1.pri

Organism:: Alosa sapidissima (American shad)

Sex:: male

Submitter:: Vertebrate Genomes Project

Date:: 2021/05/25

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_018492685.1 (latest)

RefSeq assembly accession:: GCF_018492685.1 (latest)

IDs:: 10117431 [UID] 26892258 [GenBank] 27280478 [RefSeq]

Select item 204127314.

IST_EnEncr_1.0

Organism:: Engraulis encrasicolus (European anchovy)

Sex:: female

Submitter:: Istanbul University

Date:: 2023/12/28

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_034702125.1 (latest)

RefSeq assembly accession:: GCF_034702125.1 (latest)

IDs:: 20412731 [UID] 51605658 [GenBank] 53500128 [RefSeq]

Select item 127037415.

AALO_Geno_1.1

Organism:: Alosa alosa (allis shad)

Infraspecific name:: Ecotype: Scorff River

Sex:: male

Submitter:: GenoFish

Date:: 2021/03/30

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_017589495.2 (latest)

RefSeq assembly accession:: GCF_017589495.1 (latest)

IDs:: 12703741 [UID] 33220288 [GenBank] 33265228 [RefSeq]

Select item 202388416.

fSarPil1.1

Organism:: Sardina pilchardus (sardine)

Submitter:: WELLCOME SANGER INSTITUTE

Date:: 2023/12/14

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_963854185.1 (latest)

RefSeq assembly accession:: GCF_963854185.1 (latest)

IDs:: 20238841 [UID] 51219148 [GenBank] 52772708 [RefSeq]

Select item 79208717.

fDenClu1.2

Organism:: Denticeps clupeoides (denticle herring)

Submitter:: SC

Date:: 2020/07/31

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_900700375.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 7920871 [UID] 21712268 [GenBank]

Select item 171460918.

S_ten_1.0

Organism:: Setipinna tenuifilis (common hairfin anchovy)

Submitter:: Zhejiang Ocean University

Date:: 2023/06/27

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_030347295.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 17146091 [UID] 43988558 [GenBank]

Select item 187356019.

fSprSpr1.1

Organism:: Sprattus sprattus (European sprat)

Submitter:: WELLCOME SANGER INSTITUTE

Date:: 2023/09/20

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_963457725.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 18735601 [UID] 47834948 [GenBank]

Select item 843550110.

TenIli1.0

Organism:: Tenualosa ilisha (Hilsa shad)

Sex:: male

Submitter:: Consortium Research Platform on Genmics, ICAR, India

Date:: 2020/11/05

Assembly type:: diploid

Assembly level:: Contig

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_015244755.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 8435501 [UID] 22952988 [GenBank]

Select item 1839790111.

S_Long_CMFRI_1.2

Organism:: Sardinella longiceps (Indian oil sardine)

Infraspecific name:: Ecotype: South west coast of India

Submitter:: Central Marine Fisheries Research Institute

Date:: 2023/09/07

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_027497455.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 18397901 [UID] 47038138 [GenBank]

Select item 2106828112.

ASM3602597v1

Organism:: Nematalosa erebi (Australian river gizzard shad)

Submitter:: CSIRO Applied Genomics Initiative

Date:: 2024/01/25

Assembly level:: Contig

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_036025975.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 21068281 [UID] 53012688 [GenBank]

Select item 2042412113.

ASM3478369v1

Organism:: Sardinella gibbosa (bony fishes)

Submitter:: Iridian Genomes

Date:: 2023/12/28

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_034783695.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 20424121 [UID] 51636908 [GenBank]

Select item 1686409114.

ASM3026435v1

Organism:: Sardinella lemuru (Bali sardinella)

Submitter:: Iridian Genomes

Date:: 2023/06/13

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_030264355.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 16864091 [UID] 43309938 [GenBank]

Select item 1519849115.

ASM2748176v1

Organism:: Tenualosa thibaudeaui (Mekong herring)

Submitter:: Shanghai Ocean University

Date:: 2022/12/28

Assembly level:: Contig

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_027481765.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 15198491 [UID] 39161078 [GenBank]

Select item 968821116.

ASM1765721v1

Organism:: Limnothrissa miodon (bony fishes)

Submitter:: EAWAG

Date:: 2021/04/02

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_017657215.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 9688211 [UID] 25915508 [GenBank]

Select item 1686406117.

ASM3026431v1

Organism:: Sardinella tawilis (freshwater sardinella)

Submitter:: Iridian Genomes

Date:: 2023/06/13

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_030264315.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 16864061 [UID] 43309898 [GenBank]

Select item 1904837118.

ASM3235327v1

Organism:: Sardinella hualiensis (Taiwan sardinella)

Submitter:: Iridian Genomes

Date:: 2023/10/04

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_032353275.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 19048371 [UID] 48529728 [GenBank]

Select item 1650256119.

ASM2987513v1

Organism:: Alosa fallax (twaite shad)

Infraspecific name:: Strain: AFAL1-T10

Submitter:: Faculty of Sciences from the University of Lisbon

Date:: 2023/04/26

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_029875135.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 16502561 [UID] 42308248 [GenBank]

Select item 1686413120.

ASM3026441v1

Organism:: Sardinella fimbriata (fringescale sardinella)

Submitter:: Iridian Genomes

Date:: 2023/06/13

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_030264415.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 16864131 [UID] 43309998 [GenBank]

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