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Pneu_cari_B80_V3

Organism name:
Pneumocystis carinii B80 (ascomycete fungi)
Infraspecific name:
Strain: B80
BioSample:
SAMN02380717
BioProject:
PRJNA223511
Submitter:
Broad Institute
Date:
2015/12/22
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001477545.1 (latest)
RefSeq assembly accession:
GCF_001477545.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LFVZ01
Assembly method:
ALLPATHS v. R47825
Genome coverage:
98.0x
Sequencing technology:
Illumina; 454; Pacific Biosciences

IDs: 600291 [UID] 2735428 [GenBank] 3465138 [RefSeq]

See Genome Information for Pneumocystis carinii

Pathogen Detection Resources

History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length7,661,456
Total ungapped length7,661,456
Number of contigs62
Contig N50465,149
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)62

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced7,661,456627,661,456465,14900