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Source database (GenBank or RefSeq) File type

ASM27957v1

Organism name:: Streptococcus pneumoniae GA17301 (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: GA17301
BioSample:: SAMN00761083
BioProject:: PRJNA48727
Submitter:: Institute for Genome Sciences
Date:: 2012/07/18
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000279575.1 (latest)
RefSeq assembly accession:: GCF_000279575.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ALCI01
Assembly method:: Celera assembler v. 6.1
Genome coverage:: 31x
Sequencing technology:: 454 GS FLX Titanium

IDs: 491448 [UID] 400468 [GenBank] 491448 [RefSeq]

See Genome Information for Streptococcus pneumoniae

Pathogen Detection Resources

There are 45864 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000279575.1	=	GCF_000279575.1	ASM27957v1	Contig	Latest GenBank, Latest RefSeq

Comment

Source DNA/bacteria is available from BEI - Biodefense and Emerging Infections Research Resources Repository, 10801 University Boulevard, Manassas, VA 20110-2209

Global statistics

Total sequence length	2,139,666
Total ungapped length	2,139,666
Number of contigs	10
Contig N50	342,728
Contig L50	3
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	10

	ANI	Query coverage	Subject coverage
Declared type	98.65	89.02	90.23
Best-match type	98.65	89.02	90.23

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ASM27957v1

See Genome Information for Streptococcus pneumoniae

Pathogen Detection Resources

There are 45864 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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