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Taxonomy

Pan paniscus

Pygmy chimpanzee (Pan paniscus) is a species of primate in the family Hominidae (great apes).

Taxonomy ID: 9597

Genomes Genes Genome Data Viewer BLAST

Search results

Items: 8

  • Filters activated: Latest, Exclude anomalous. Clear all to show 11 items.
1.

NHGRI_mPanPan1-v1.1-0.1.freeze_pri

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
male
Submitter:
National Human Genome Research Institute, National Institutes of Health
Date:
2023/03/20
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_029289425.1 (latest)
RefSeq assembly accession:
GCF_029289425.1 (latest)
IDs:
16214801 [UID] 41561638 [GenBank] 41977428 [RefSeq]

2.

NHGRI_mPanPan1-v1.1-0.1.freeze_mat

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
male
Submitter:
National Human Genome Research Institute, National Institutes of Health
Date:
2023/02/27
Assembly type:
haploid (maternal haplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_028858845.1 (latest)
RefSeq assembly accession:
n/a
IDs:
16072011 [UID] 41232188 [GenBank]

3.

NHGRI_mPanPan1-v1.1-0.1.freeze_pat

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
male
Submitter:
National Human Genome Research Institute, National Institutes of Health
Date:
2023/02/27
Assembly type:
haploid (paternal haplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_028858825.1 (latest)
RefSeq assembly accession:
n/a
IDs:
16072021 [UID] 41232278 [GenBank]

4.

Mhudiblu_PPA_v2

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
female
Submitter:
University of Washington
Date:
2021/03/18
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_013052645.3 (latest)
RefSeq assembly accession:
n/a
IDs:
9548001 [UID] 25597578 [GenBank]

5.

Mhudiblu_PPA_hifiasm-v0.15.2.pri

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
female
Submitter:
University of Washington
Date:
2023/06/07
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_030221875.1 (latest)
RefSeq assembly accession:
n/a
IDs:
16840231 [UID] 43265948 [GenBank]

6.

Mhudiblu_PPA_hifiasm-v0.15.2.alt

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
female
Submitter:
University of Washington
Date:
2023/06/07
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_030221885.1 (latest)
RefSeq assembly accession:
n/a
IDs:
16840221 [UID] 43265928 [GenBank]

7.

panpan1.1

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
female
Submitter:
Max-Planck Institute for Evolutionary Anthropology
Date:
2015/08/18
Assembly level:
Chromosome
Genome representation:
full
Synonyms:
panPan2
GenBank assembly accession:
GCA_000258655.2 (latest)
RefSeq assembly accession:
GCF_000258655.2 (suppressed)
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
474211 [UID] 2242958 [GenBank] 2348668 [RefSeq]

8.

panPan.msY.makovalab.ver1

Organism:
Pan paniscus (pygmy chimpanzee)
Sex:
male
Submitter:
Penn State University
Date:
2020/10/26
Assembly level:
Scaffold
Genome representation:
partial
GenBank assembly accession:
GCA_015021855.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
8313331 [UID] 22680038 [GenBank]

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