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ASM9122v2

Organism name:: Encephalitozoon cuniculi GB-M1 (microsporidians)
Isolate:: GB-M1
BioSample:: SAMEA3138295
BioProject:: PRJNA13833
Submitter:: Genoscope
Date:: 2017/03/09
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_000091225.2 (latest)
RefSeq assembly accession:: GCF_000091225.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes

IDs: 1678371 [UID] 6375558 [GenBank] 39062468 [RefSeq]

See Genome Information for Encephalitozoon cuniculi

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000091225.2	=	GCF_000091225.2	ASM9122v2	Chromosome	Latest GenBank, Latest RefSeq
GCA_000091225.1	=	GCF_000091225.1	ASM9122v1	Chromosome	Replaced GenBank, Replaced RefSeq

Comment

Corresponding author : Equipe de Parasitologie Moleculaire et Cellulaire, UMR CNRS 6023, Universite Blaise Pascal, 63177 Aubiere cedex, France E-mail : Christian.VIVARES@lbp.univ-bpclermont.fr Tel : (33) (0)4.73.40.74.57 Fax : (33) (0)4.73.40.74.55 Web : http://www.protistes.univ-bpclermont.fr/fr/parasito.htm The submitted sequence encompasses the coding ... core of the chromosome. The telomeric and subtelomeric sequences are not included in this submission.  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::INSDC submitter
Annotation Status::Full annotation
Annotation Pipeline::Eukaryotic Annotation Propagation Pipeline
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,497,519
Total ungapped length	2,496,719
Gaps between scaffolds	0
Number of scaffolds	11
Scaffold N50	220,294
Scaffold L50	6
Number of contigs	12
Contig N50	218,329
Contig L50	6
Total number of chromosomes and plasmids	11
Number of component sequences (WGS or clone)	11

Molecule name	GenBank sequence		RefSeq sequence
Chromosome I	AL391737.2	=	NC_003242.2
Chromosome II	AL590442.1	=	NC_003229.1
Chromosome III	AL590443.1	=	NC_003230.1
Chromosome IV	AL590444.1	=	NC_003231.1
Chromosome V	AL590445.1	=	NC_003232.1
Chromosome VI	AL590446.1	=	NC_003233.1
Chromosome VII	AL590447.1	=	NC_003234.1
Chromosome VIII	AL590448.1	=	NC_003235.1
Chromosome IX	AL590451.2	=	NC_003238.2
Chromosome X	AL590449.1	=	NC_003236.1
Chromosome XI	AL590450.2	=	NC_003237.2

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	2,497,519	11	2,496,719	220,294	1
Chromosome I	209,982	1	209,982	209,982	0
Chromosome II	197,426	1	197,426	197,426	0
Chromosome III	194,439	1	194,439	194,439	0
Chromosome IV	218,329	1	218,329	218,329	0
Chromosome V	211,018	1	211,018	211,018	0
Chromosome VI	220,294	1	220,294	220,294	0
Chromosome VII	226,576	1	226,576	226,576	0
Chromosome VIII	238,147	1	238,147	238,147	0
Chromosome IX	251,002	1	250,202	251,002	1
Chromosome X	262,797	1	262,797	262,797	0
Chromosome XI	267,509	1	267,509	267,509	0

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ASM9122v2

See Genome Information for Encephalitozoon cuniculi

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

Global statistics

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