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ASM15182v1

Organism name:
Oryzias latipes (Japanese medaka)
Infraspecific name:
Strain: HNI
BioSample:
SAMD00036522
BioProject:
PRJNA19569
Submitter:
Medaka genome sequencing project
Date:
2007/04/26
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000151825.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BAAE01

IDs: 175178 [UID] 175178 [GenBank]

See Genome Information for Oryzias latipes

There are 20 assemblies for this organism

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History (Show revision history)

Comment

Medaka genome sequencing project web site provides more details and informative views of the genome assembly.
URL:http://medaka.utgenome.org/

Global statistics

Total sequence length662,701,370
Total ungapped length585,154,741
Gaps between scaffolds0
Number of scaffolds82,496
Scaffold N5025,745
Scaffold L507,701
Number of contigs346,141
Contig N502,223
Contig L5076,136
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)346,141

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced662,701,37082,496585,154,74125,745263,6450
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