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ASM19851v1

Organism name:
gamma proteobacterium HdN1 (g-proteobacteria)
Taxonomy check:
Inconclusive
BioSample:
SAMEA2272402
BioProject:
PRJEA46849
Submitter:
Max Planck Society
Date:
2010/07/29
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Excluded from RefSeq:
  • genus undefined
GenBank assembly accession:
GCA_000198515.1 (latest)
RefSeq assembly accession:
GCF_000198515.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 259338 [UID] 355018 [GenBank] 259338 [RefSeq]

See Genome Information for gamma proteobacterium HdN1

History (Show revision history)

Comment

This project was carried out by
*Max Planck Institute for Marine Microbiology, Bremen, Germany; *ICBM, General and Molecular Microbiology, Oldenburg, Germany; *GeoForschungsZentrum, Potsdam, Germany;
*Max Planck Institute for Molecular Genetics, Berlin, Germany; -------------- Genome Center
 Center: Max Planck Institute for Molecular ... Genetics 
 Center code: MPIMG
-------------- Summary Statistics
 Sequencing vector: pUC19; 100% of reads
 Chemistry: Dye-terminator Big Dye; 100% of reads 
 Assembly program: Phrap; version 0.990329
--------------  more

Global statistics

Total sequence length4,587,455
Total ungapped length4,587,455
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000198525.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome FP929140.1=NC_014366.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,587,455

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
gamma proteobacterium HdN1gamma proteobacterium HdN1

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_020320395.1Thalassolituus marinustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type93.660.380.45

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena