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ASM71507v2

Organism name:
Nicotiana tabacum (common tobacco)
Infraspecific name:
Cultivar: K326
BioSample:
SAMN02316628
BioProject:
PRJNA208210
Submitter:
Philip Morris International R&D
Date:
2023/11/13
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_000715075.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AWOJ02
Assembly method:
Flye v. 2.9.1
Expected final version:
no
Genome coverage:
25.0x
Sequencing technology:
Oxford Nanopore; Illumina

IDs: 19672291 [UID] 49969548 [GenBank]

See Genome Information for Nicotiana tabacum

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,995,639,705
Total ungapped length3,995,497,705
Gaps between scaffolds0
Number of scaffolds699
Scaffold N50166,564,946
Scaffold L5011
Number of contigs1,409
Contig N5011,819,318
Contig L5097
Total number of chromosomes and plasmids24
Number of component sequences (WGS or clone)699

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000715085.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM065979.1n/an/a0
Chromosome 2CM065980.1n/an/a0
Chromosome 3CM065981.1n/an/a0
Chromosome 4CM065982.1n/an/a0
Chromosome 5CM065983.1n/an/a0
Chromosome 6CM065984.1n/an/a0
Chromosome 7CM065985.1n/an/a0
Chromosome 8CM065986.1n/an/a0
Chromosome 9CM065987.1n/an/a0
Chromosome 10CM065988.1n/an/a0
Chromosome 11CM065989.1n/an/a0
Chromosome 12CM065990.1n/an/a0
Chromosome 13CM065991.1n/an/a0
Chromosome 14CM065992.1n/an/a0
Chromosome 15CM065993.1n/an/a0
Chromosome 16CM065994.1n/an/a0
Chromosome 17CM065995.1n/an/a0
Chromosome 18CM065996.1n/an/a0
Chromosome 19CM065997.1n/an/a0
Chromosome 20CM065998.1n/an/a0
Chromosome 21CM065999.1n/an/a0
Chromosome 22CM066000.1n/an/a0
Chromosome 23CM066001.1n/an/a0
Chromosome 24CM066002.1n/an/a0
unplacedn/an/an/a675

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All3,995,639,7056993,995,497,705166,564,9467100
Chromosome 1222,086,2881222,076,888222,086,288470
Chromosome 2130,336,7811130,333,381130,336,781170
Chromosome 3215,112,7381215,108,538215,112,738210
Chromosome 4150,061,8371150,055,437150,061,837320
Chromosome 5166,564,9461166,560,146166,564,946240
Chromosome 6218,894,3781218,886,378218,894,378400
Chromosome 7180,540,2031180,533,003180,540,203360
Chromosome 8212,334,3171212,328,517212,334,317290
Chromosome 9128,373,8581128,369,858128,373,858200
Chromosome 10173,419,1271173,412,327173,419,127340
Chromosome 11182,075,8981182,069,498182,075,898320
Chromosome 12131,632,2071131,624,607131,632,207380
Chromosome 13135,455,0841135,450,084135,455,084250
Chromosome 14117,149,0231117,140,423117,149,023430
Chromosome 15135,283,6891135,279,889135,283,689190
Chromosome 16171,654,1721171,646,772171,654,172370
Chromosome 17153,689,5551153,680,355153,689,555460
Chromosome 18161,231,1591161,227,559161,231,159180
Chromosome 19151,880,6261151,873,426151,880,626360
Chromosome 20168,699,0831168,695,283168,699,083190
Chromosome 21101,618,7451101,615,345101,618,745170
Chromosome 22234,076,5841234,068,384234,076,584410
Chromosome 23146,657,3091146,652,709146,657,309230
Chromosome 24112,906,5201112,903,320112,906,520160
unplaced93,905,57867593,905,578291,58900