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CA 8.2 MHAP

Organism name:
Drosophila melanogaster (fruit fly)
Isolate:
ISO1
Sex:
male
BioSample:
SAMN02614627
BioProject:
PRJNA237120
Submitter:
Pacific Biosciences
Date:
2014/11/13
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000778455.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JSAE01
Assembly method:
Celera Assembler v. 8.2
Expected final version:
yes
Genome coverage:
90.0x
Sequencing technology:
PacBio

IDs: 222901 [UID] 1377998 [GenBank]

See Genome Information for Drosophila melanogaster

There are 119 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length164,080,454
Total ungapped length164,080,454
Number of contigs789
Contig N5013,636,574
Contig L504
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)789

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PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced164,060,915788164,060,91513,636,57400
MoleculeSequence RoleTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds19,539019,53910119,539019,53919,539019,539000000