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Source database (GenBank or RefSeq) File type

ASM107486v1

Organism name:: Staphylococcus epidermidis (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: 654_SEPI
BioSample:: SAMN03197856
BioProject:: PRJNA267549
Submitter:: University of Washington
Date:: 2015/07/10
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_001074865.1 (latest)
RefSeq assembly accession:: GCF_001074865.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JUYK01
Assembly method:: ABYSS v. 1.3.5
Genome coverage:: 13x
Sequencing technology:: Illumina HiSeq

IDs: 374551 [UID] 1887288 [GenBank] 2018318 [RefSeq]

See Genome Information for Staphylococcus epidermidis

Pathogen Detection Resources

There are 4824 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001074865.1	=	GCF_001074865.1	ASM107486v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length	2,440,265
Total ungapped length	2,438,846
Gaps between scaffolds	0
Number of scaffolds	192
Scaffold N50	26,396
Scaffold L50	30
Number of contigs	207
Contig N50	25,737
Contig L50	32
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	192

	ANI	Query coverage	Subject coverage
Declared type	99.67	92.29	97.75
Best-match type	99.67	92.29	97.75

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ASM107486v1

See Genome Information for Staphylococcus epidermidis

Pathogen Detection Resources

There are 4824 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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