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ASM211905v1

Organism name:
Enterococcus faecium (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 463-ANA
BioSample:
SAMN06850204
BioProject:
PRJNA384868
Submitter:
Children's Hospital of Philadelphia
Date:
2017/05/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002119055.1 (latest)
RefSeq assembly accession:
GCF_002119055.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NETE01
Assembly method:
HGAP v. 2
Expected final version:
no
Genome coverage:
150x
Sequencing technology:
PacBio

IDs: 1091401 [UID] 4455198 [GenBank] 4456738 [RefSeq]

See Genome Information for Enterococcus faecium

There are 23391 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,188,377
Total ungapped length3,188,377
Number of contigs15
Contig N50446,229
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)15

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,188,377153,188,377446,22900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus faeciumEnterococcus faecium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001544255.1Enterococcus faecium NBRC 100486type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001544255.1Enterococcus faeciumtype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.5373.6694.51
Best-match type99.5373.6694.51

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna