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ASM214077v1

Organism name:
Enterococcus sp. 5B7_DIV0075 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 5B7_DIV0075
BioSample:
SAMN04633999
BioProject:
PRJNA313452
Submitter:
Broad Institute
Date:
2017/05/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_002140775.1 (latest)
RefSeq assembly accession:
GCF_002140775.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NGMR01
Assembly method:
allpaths v. R48559
Genome coverage:
122.0x
Sequencing technology:
Illumina

IDs: 1102261 [UID] 4477748 [GenBank] 4514268 [RefSeq]

See Genome Information for Enterococcus sp. 5B7_DIV0075

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length2,742,736
Total ungapped length2,734,363
Gaps between scaffolds0
Number of scaffolds5
Scaffold N502,732,188
Scaffold L501
Number of contigs31
Contig N50132,666
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)5

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,742,73652,734,3632,732,188260

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus sp. 5B7_DIV0075Enterococcus sp. 5B7_DIV0075

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_007989705.1Enterococcus thailandicustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.5090.8789.26

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna