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Clint_PTR_v0

Organism name:
Pan troglodytes (chimpanzee)
Isolate:
Yerkes chimp pedigree #C0471 (Clint)
Sex:
male
BioSample:
SAMN06272697
BioProject:
PRJNA369439
Submitter:
University of Washington
Date:
2018/01/16
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002880755.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
NBAG01
Assembly method:
Falcon v. (git hash: 91e700c4) Nov 2015
Expected final version:
no
Genome coverage:
124.0x
Sequencing technology:
PacBio; Illumina HiSeq

IDs: 1523301 [UID] 5886268 [GenBank]

See Genome Information for Pan troglodytes

There are 10 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,992,665,144
Total ungapped length2,992,665,144
Number of contigs4,896
Contig N5012,759,992
Contig L5064
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4,896

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,992,665,1444,8962,992,665,14412,759,99200