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EBC7_Spombe

Organism name:
Schizosaccharomyces pombe (fission yeast)
Infraspecific name:
Strain: EBC7
BioSample:
SAMN08689425
BioProject:
PRJNA438043
Submitter:
Uppsala University
Date:
2018/05/03
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_003086255.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PYFU01
Assembly method:
Canu v. 1.5
Expected final version:
yes
Genome coverage:
200.0x
Sequencing technology:
PacBio

IDs: 1690541 [UID] 6442818 [GenBank]

See Genome Information for Schizosaccharomyces pombe

There are 20 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length12,624,287
Total ungapped length12,624,287
Gaps between scaffolds0
Number of scaffolds6
Scaffold N502,927,022
Scaffold L502
Number of contigs6
Contig N502,927,022
Contig L502
Total number of chromosomes and plasmids3
Number of component sequences (WGS or clone)6

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_003086265.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome ICM009800.1n/an/a0
Chromosome IIn/an/an/a3
Chromosome IIIn/an/an/a2

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
AllAssembled molecule12,624,287612,624,2872,927,02200
Chromosome IAssembled molecule5,571,19315,571,1935,571,19300
Chromosome IIAllAssembled moleculeUnlocalized scaffolds4,620,82404,620,8243034,620,82404,620,8242,927,02202,927,022000000
Chromosome IIIAllAssembled moleculeUnlocalized scaffolds2,432,27002,432,2702022,432,27002,432,2701,342,02701,342,027000000
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