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ASM327711v1

Organism name:
Saccharomyces cerevisiae (brewer's yeast)
Infraspecific name:
Strain: HN6
BioSample:
SAMN07436823
BioProject:
PRJNA396809
Submitter:
Institute Of Microbiology Chinese Academy of Sciences
Date:
2018/11/28
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_003277115.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
NPYJ01
Assembly method:
Velvet v. 1.2.10
Expected final version:
yes
Reference guided assembly:
GCA_000146045.2
Genome coverage:
582x
Sequencing technology:
Illumina HiSeq

IDs: 2124431 [UID] 7950838 [GenBank]

See Genome Information for Saccharomyces cerevisiae

There are 1630 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length11,790,380
Total ungapped length11,734,825
Gaps between scaffolds0
Number of scaffolds60
Scaffold N501,257,951
Scaffold L504
Number of contigs150
Contig N50741,750
Contig L506
Total number of chromosomes and plasmids17
Number of component sequences (WGS or clone)60

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCA_003277165.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome ICM011714.1n/an/a0
Chromosome IICM011715.1n/an/a0
Chromosome IIICM011716.1n/an/a0
Chromosome IVCM011717.1n/an/a0
Chromosome VCM011718.1n/an/a0
Chromosome VICM011719.1n/an/a0
Chromosome VIICM011720.1n/an/a0
Chromosome VIIICM011721.1n/an/a0
Chromosome IXCM011722.1n/an/a0
Chromosome XCM011723.1n/an/a0
Chromosome XICM011724.1n/an/a0
Chromosome XIICM011725.1n/an/a0
Chromosome XIIICM011726.1n/an/a0
Chromosome XIVCM011727.1n/an/a0
Chromosome XVCM011728.1n/an/a0
Chromosome XVICM011729.1n/an/a0
unplacedn/an/an/a43

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All11,703,7545911,653,9071,257,951810
Chromosome I218,3371214,846218,33750
Chromosome II800,4321799,433800,43210
Chromosome III298,4191297,172298,41940
Chromosome IV1,466,44511,460,9221,466,44570
Chromosome V552,9091550,201552,90980
Chromosome VI278,5901277,480278,59020
Chromosome VII1,466,39311,457,0091,466,393120
Chromosome VIII1,257,95111,255,9531,257,95120
Chromosome IX7,34116,3427,34110
Chromosome X719,2541716,305719,25460
Chromosome XI658,1131658,059658,11310
Chromosome XII2,049,70912,045,2172,049,70950
Chromosome XIII919,9291918,550919,92950
Chromosome XIV15,085112,03615,08540
Chromosome XV27,545121,55127,54560
Chromosome XVI904,9541902,905904,95430
unplaced62,3484359,9264,54790
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds86,626086,62610180,918080,91886,626086,626909000