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ASM346068v1

Organism name:
Blautia sp. OF03-13 (firmicutes)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: OF03-13
BioSample:
SAMN09736689
BioProject:
PRJNA482748
Submitter:
BGI
Date:
2018/08/31
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_003460685.1 (latest)
RefSeq assembly accession:
GCF_003460685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QTVR01
Assembly method:
SPAdes v. 3.1.0
Expected final version:
yes
Genome coverage:
100x
Sequencing technology:
IonProton

IDs: 1920721 [UID] 7290478 [GenBank] 7346558 [RefSeq]

See Genome Information for Blautia sp. OF03-13

History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI
Annotation Date::08/09/2018 10:56:25
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::4.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::3,393
CDS (total)::3,325
Genes (coding)::2,959
CDS (coding)::2,959
Genes (RNA)::68
rRNAs::4, 8 (16S, 23S)
partial rRNAs::4, 8 (16S, 23S)
tRNAs::52
ncRNAs::4
Pseudo Genes (total)::366
Pseudo Genes (ambiguous residues)::0 of 366
Pseudo Genes (frameshifted)::263 of 366
Pseudo Genes (incomplete)::104 of 366
Pseudo Genes (internal stop)::24 of 366
Pseudo Genes (multiple problems)::24 of 366
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,545,221
Total ungapped length3,545,221
Number of contigs70
Contig N50174,833
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)70

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,545,221703,545,221174,83300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Blautia sp. OF03-13Blautia sp. OF03-13

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014287775.1Eubacterium segnetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type95.812.643.20

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena