PgNI

Organism name:: Pyricularia grisea (ascomycete fungi)
Infraspecific name:: Strain: NI907
BioSample:: SAMN10496230
BioProject:: PRJNA507314
Submitter:: Academia Sinica
Date:: 2019/03/19
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_004355905.1 (latest)
RefSeq assembly accession:: GCF_004355905.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: RRCK01
Assembly method:: AllPaths v. 48123
Expected final version:: yes
Genome coverage:: 181.0x
Sequencing technology:: Illumina HiSeq

IDs: 2348851 [UID] 8759978 [GenBank] 14339938 [RefSeq]

See Genome Information for Pyricularia grisea

Pathogen Detection Resources

There are 13 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_004355905.1	=	GCF_004355905.1	PgNI	Chromosome	Latest GenBank, Latest RefSeq

Comment

Annotation was added to the contigs in May 2019

Global statistics

Total sequence length	44,557,582
Total ungapped length	44,462,374
Gaps between scaffolds	0
Number of scaffolds	43
Scaffold N50	5,912,490
Scaffold L50	3
Number of contigs	271
Contig N50	298,533
Contig L50	42
Total number of chromosomes and plasmids	4
Number of component sequences (WGS or clone)	43

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome I	CM015042.1	=	NC_044973.1	0
Chromosome V	n/a	n/a	n/a	2
Chromosome VI	CM015043.1	=	NC_044974.1	0
Chromosome VII	CM015044.1	=	NC_044975.1	0
unplaced	n/a	n/a	n/a	38

Molecule	Sequence Role	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	Assembled molecule	44,557,582	43	44,462,374	5,912,490	228	0
Chromosome I	Assembled molecule	5,912,490	1	5,905,211	5,912,490	22	0
Chromosome V	AllAssembled moleculeUnlocalized scaffolds	4,852,35404,852,354	202	4,842,34304,842,343	3,600,31703,600,317	32032	000
Chromosome VI	Assembled molecule	1,282,210	1	1,281,920	1,282,210	4	0
Chromosome VII	Assembled molecule	3,857,439	1	3,856,162	3,857,439	20	0
unplaced	Assembled molecule	28,653,089	38	28,576,738	8,553,071	150	0

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PgNI

See Genome Information for Pyricularia grisea

Pathogen Detection Resources

There are 13 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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