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ASM784412v1

Organism name:
Sinonovacula constricta (Chinese razor clam)
Isolate:
YC_2019
Sex:
male
BioSample:
SAMN10522931
BioProject:
PRJNA508451
Submitter:
Novogene Bioinformatics Technology Corporation
Date:
2019/08/08
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_007844125.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
RXXH01
Assembly method:
FALCON v. 1.2.4; fragScaff v. 140324
Expected final version:
yes
Genome coverage:
561.0x
Sequencing technology:
Illumina HiSeq; PacBio Sequel

IDs: 4300991 [UID] 13113648 [GenBank]

See Genome Information for Sinonovacula constricta

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,220,848,272
Total ungapped length1,212,679,988
Gaps between scaffolds0
Number of scaffolds362
Scaffold N5065,929,677
Scaffold L508
Number of contigs2,450
Contig N50976,936
Contig L50390
Total number of chromosomes and plasmids19
Number of component sequences (WGS or clone)362

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_007844145.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM017555.1n/an/a0
Chromosome 2CM017556.1n/an/a0
Chromosome 3CM017557.1n/an/a0
Chromosome 4CM017558.1n/an/a0
Chromosome 5CM017559.1n/an/a0
Chromosome 6CM017560.1n/an/a0
Chromosome 7CM017561.1n/an/a0
Chromosome 8CM017562.1n/an/a0
Chromosome 9CM017563.1n/an/a0
Chromosome 10CM017564.1n/an/a0
Chromosome 11CM017565.1n/an/a0
Chromosome 12CM017566.1n/an/a0
Chromosome 13CM017567.1n/an/a0
Chromosome 14CM017568.1n/an/a0
Chromosome 15CM017569.1n/an/a0
Chromosome 16CM017570.1n/an/a0
Chromosome 17CM017571.1n/an/a0
Chromosome 18CM017572.1n/an/a0
Chromosome 19CM017573.1n/an/a0
unplacedn/an/an/a343

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All1,220,848,2723621,212,679,98865,929,6772,0880
Chromosome 197,359,909196,773,44997,359,9091710
Chromosome 286,077,222185,543,06286,077,2221270
Chromosome 383,453,457182,980,04883,453,4571180
Chromosome 482,053,363181,491,79482,053,3631580
Chromosome 569,968,657169,553,74769,968,6571040
Chromosome 668,498,203168,052,29668,498,2031170
Chromosome 765,955,972165,600,11965,955,9721010
Chromosome 865,929,677165,588,21465,929,677810
Chromosome 962,064,139161,638,72562,064,1391030
Chromosome 1060,218,043159,714,55360,218,0431290
Chromosome 1158,757,921158,368,27658,757,921980
Chromosome 1258,450,733158,090,10758,450,733920
Chromosome 1356,625,310156,213,37656,625,3101020
Chromosome 1456,030,075155,703,05256,030,075900
Chromosome 1555,532,449155,170,84955,532,449900
Chromosome 1653,731,326152,997,77253,731,3261670
Chromosome 1752,731,897152,421,45252,731,897760
Chromosome 1846,980,502146,652,61646,980,502930
Chromosome 1934,882,257134,603,02834,882,257680
unplaced5,547,1603435,523,45327,10030