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ASM1104912v1

Organism name:
Candidatus Gracilibacteria bacterium (bacteria)
Taxonomy check:
Inconclusive
Isolate:
SpSt-1192
BioSample:
SAMN09639109
BioProject:
PRJNA480137
Submitter:
The University of Hong Kong
Date:
2020/03/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • fragmented assembly
  • genus undefined
GenBank assembly accession:
GCA_011049125.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DSCI01
Assembly method:
MEGAHIT v. 1.1.2
Expected final version:
yes
Genome coverage:
11.09x
Sequencing technology:
Illumina HiSeq 2500

IDs: 6090761 [UID] 17329758 [GenBank]

See Genome Information for Candidatus Gracilibacteria bacterium

There are 216 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length524,303
Total ungapped length524,303
Number of contigs170
Contig N503,141
Contig L5053
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)170

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced524,303170524,3033,14100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Gracilibacteria bacteriumCandidatus Gracilibacteria bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana