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zebrafinch.phase0_contigs

Organism name:
Taeniopygia guttata (zebra finch)
Isolate:
Blue55
Sex:
female
BioSample:
SAMN09946140
BioProject:
PRJNA604789
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_012069615.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAAIVN01
Assembly method:
FALCON-Unzip, FALCON-Phase v. pbassembly v0.0.2
Expected final version:
yes
Genome coverage:
70x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_012069575.1 (alternate pseudohaplotype of diploid)

IDs: 6608371 [UID] 18439258 [GenBank]

See Genome Information for Taeniopygia guttata

There are 15 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,070,299,142
Total ungapped length1,070,299,142
Number of contigs957
Contig N503,481,582
Contig L5084
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)957

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,070,299,1429571,070,299,1423,481,58200