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ASM1289597v1

Organism name:
Aspergillus flavus (ascomycete fungi)
Infraspecific name:
Strain: A9
BioSample:
SAMN14350205
BioProject:
PRJNA607981
Submitter:
University of Georgia
Date:
2020/04/27
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_012895975.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
SPAdes v. 3.13.1; RaGOO v. 1.1
Expected final version:
yes
Reference guided assembly:
Aspergillus flavus AF13
Genome coverage:
83x
Sequencing technology:
Illumina HiSeq

IDs: 7014711 [UID] 19316758 [GenBank]

See Genome Information for Aspergillus flavus

There are 240 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length37,365,814
Total ungapped length37,339,214
Gaps between scaffolds0
Number of scaffolds8
Scaffold N504,649,347
Scaffold L504
Number of contigs274
Contig N50376,125
Contig L5030
Total number of chromosomes and plasmids8
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_012896065.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP051035.1n/an/a
Chromosome 2CP051036.1n/an/a
Chromosome 3CP051037.1n/an/a
Chromosome 4CP051038.1n/an/a
Chromosome 5CP051039.1n/an/a
Chromosome 6CP051040.1n/an/a
Chromosome 7CP051041.1n/an/a
Chromosome 8CP051042.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All37,365,814837,339,2144,649,3472660
Chromosome 16,807,89816,801,7986,807,898610
Chromosome 26,230,94016,227,6406,230,940330
Chromosome 35,376,66715,373,6675,376,667300
Chromosome 44,649,34714,646,5474,649,347280
Chromosome 54,506,71414,503,4144,506,714330
Chromosome 63,968,62513,965,5253,968,625310
Chromosome 72,706,81512,704,3152,706,815250
Chromosome 83,118,80813,116,3083,118,808250