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ASM1289641v1

Organism name:
Aspergillus flavus (ascomycete fungi)
Infraspecific name:
Strain: VCG1
BioSample:
SAMN14350211
BioProject:
PRJNA607981
Submitter:
University of Georgia
Date:
2020/04/27
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_012896415.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
SPAdes v. 3.13.1; RaGOO v. 1.1
Expected final version:
yes
Reference guided assembly:
Aspergillus flavus AF13
Genome coverage:
141x
Sequencing technology:
Illumina HiSeq

IDs: 7014741 [UID] 19317168 [GenBank]

See Genome Information for Aspergillus flavus

There are 240 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length36,932,799
Total ungapped length36,914,899
Gaps between scaffolds0
Number of scaffolds8
Scaffold N504,581,271
Scaffold L504
Number of contigs187
Contig N50463,546
Contig L5027
Total number of chromosomes and plasmids8
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_012896485.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP051091.1n/an/a
Chromosome 2CP051092.1n/an/a
Chromosome 3CP051093.1n/an/a
Chromosome 4CP051094.1n/an/a
Chromosome 5CP051095.1n/an/a
Chromosome 6CP051096.1n/an/a
Chromosome 7CP051097.1n/an/a
Chromosome 8CP051098.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All36,932,799836,914,8994,581,2711790
Chromosome 16,454,43616,450,3366,454,436410
Chromosome 26,266,38016,263,6806,266,380270
Chromosome 35,024,15615,022,0565,024,156210
Chromosome 44,544,86714,543,1674,544,867170
Chromosome 54,581,27114,579,1714,581,271210
Chromosome 63,985,53413,982,8343,985,534270
Chromosome 72,959,02412,957,2242,959,024180
Chromosome 83,117,13113,116,4313,117,13170