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ASM1289670v1

Organism name:
Aspergillus flavus (ascomycete fungi)
Infraspecific name:
Strain: K49
BioSample:
SAMN14350208
BioProject:
PRJNA607981
Submitter:
University of Georgia
Date:
2020/04/27
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_012896705.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
SPAdes v. 3.13.1; RaGOO v. 1.1
Expected final version:
yes
Reference guided assembly:
Aspergillus flavus AF13
Genome coverage:
68x
Sequencing technology:
Illumina HiSeq

IDs: 7014771 [UID] 19317448 [GenBank]

See Genome Information for Aspergillus flavus

There are 240 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length37,271,659
Total ungapped length37,248,559
Gaps between scaffolds0
Number of scaffolds8
Scaffold N505,019,783
Scaffold L504
Number of contigs239
Contig N50432,477
Contig L5029
Total number of chromosomes and plasmids8
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_012896765.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP051075.1n/an/a
Chromosome 2CP051076.1n/an/a
Chromosome 3CP051077.1n/an/a
Chromosome 4CP051078.1n/an/a
Chromosome 5CP051079.1n/an/a
Chromosome 6CP051080.1n/an/a
Chromosome 7CP051081.1n/an/a
Chromosome 8CP051082.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All37,271,659837,248,5595,019,7832310
Chromosome 15,692,59015,688,1905,692,590440
Chromosome 26,357,94416,354,8446,357,944310
Chromosome 35,019,78315,017,3835,019,783240
Chromosome 44,684,03614,681,3364,684,036270
Chromosome 55,280,27315,276,6735,280,273360
Chromosome 64,115,61814,113,0184,115,618260
Chromosome 72,996,29912,993,7992,996,299250
Chromosome 83,125,11613,123,3163,125,116180