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ASM1289699v1

Organism name:
Aspergillus flavus (ascomycete fungi)
Infraspecific name:
Strain: A1
BioSample:
SAMN14350204
BioProject:
PRJNA607981
Submitter:
University of Georgia
Date:
2020/04/27
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_012896995.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
SPAdes v. 3.13.1; RaGOO v. 1.1
Expected final version:
yes
Reference guided assembly:
Aspergillus flavus AF13
Genome coverage:
71x
Sequencing technology:
Illumina HiSeq

IDs: 7014791 [UID] 19317738 [GenBank]

See Genome Information for Aspergillus flavus

There are 240 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length37,254,483
Total ungapped length37,230,383
Gaps between scaffolds0
Number of scaffolds8
Scaffold N504,680,215
Scaffold L504
Number of contigs249
Contig N50447,896
Contig L5028
Total number of chromosomes and plasmids8
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_012897045.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP051059.1n/an/a
Chromosome 2CP051060.1n/an/a
Chromosome 3CP051061.1n/an/a
Chromosome 4CP051062.1n/an/a
Chromosome 5CP051063.1n/an/a
Chromosome 6CP051064.1n/an/a
Chromosome 7CP051065.1n/an/a
Chromosome 8CP051066.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All37,254,483837,230,3834,680,2152410
Chromosome 16,045,88416,040,7846,045,884510
Chromosome 26,587,32916,584,2296,587,329310
Chromosome 35,043,33315,040,8335,043,333250
Chromosome 44,607,46314,605,1634,607,463230
Chromosome 54,680,21514,676,6154,680,215360
Chromosome 64,508,43914,505,0394,508,439340
Chromosome 72,645,07512,643,0752,645,075200
Chromosome 83,136,74513,134,6453,136,745210