U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM1318447v1

Organism name:
Acipenser oxyrinchus oxyrinchus (Atlantic sturgeon)
Infraspecific name:
Ecotype: Atlantic Coast
Sex:
pooled male and female
BioSample:
SAMN14251471
BioProject:
PRJNA564091
Submitter:
USGS Leetown Science Center
Date:
2020/05/28
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_013184475.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JABEPO01
Assembly method:
CLC Genomics WorkBench v. 9.0.1
Expected final version:
no
Genome coverage:
34.0x
Sequencing technology:
Illumina NextSeq

IDs: 7187611 [UID] 19749518 [GenBank]

See Genome Information for Acipenser oxyrinchus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length991,502,287
Total ungapped length991,502,287
Number of contigs1,317,395
Contig N501,104
Contig L50256,786
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,317,395

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced991,502,2871,317,395991,502,2871,10400