ASM1490585v1

Organism name:: Homo sapiens (human)
BioSample:: SAMD00243993
BioProject:: PRJDB10452
Submitter:: Tohoku University Advanced Research Institute for Innovations in Next-Generation Medicine
Date:: 2020/09/26
Assembly level:: Chromosome
Genome representation:: full
GenBank assembly accession:: GCA_014905855.1 (latest)
RefSeq assembly accession:: n/a
RefSeq assembly and GenBank assembly identical:: n/a
Assembly method:: Falcon v. 2017.11.02-16.04-py2.7- ucs2.tar.gz; BionanoSolve v. 3.1, v. 3.2
Genome coverage:: 1167x
Sequencing technology:: PacBio RSII; Bionano; Illumina HiSeq

IDs: 8255951 [UID] 22545898 [GenBank]

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1094 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_014905855.1	n/a	n/a	ASM1490585v1	Chromosome	Latest GenBank

Comment

The Data Access Committee of the National Bioscience Database Center (NBDC) approved that this personal data was made published according to the NBDC Guidelines for Human Data Sharing (https://humandbs.biosciencedbc.jp/en/guidelines/data-sharing- guidelines) as the NBDC Research ID hum0248 and the application ... ID J-DS000276-001.

Please visit our website, jMorp
https://jmorp.megabank.tohoku.ac.jp/

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Global statistics

Total sequence length	3,085,782,898
Total ungapped length	2,834,655,675
Gaps between scaffolds	0
Number of scaffolds	624
Scaffold N50	141,953,703
Scaffold L50	9
Number of contigs	1,071
Contig N50	23,601,496
Contig L50	32
Total number of chromosomes and plasmids	25
Number of component sequences (WGS or clone)	624

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	AP023461.1	n/a	n/a	0
Chromosome 2	AP023462.1	n/a	n/a	0
Chromosome 3	AP023463.1	n/a	n/a	0
Chromosome 4	AP023464.1	n/a	n/a	0
Chromosome 5	AP023465.1	n/a	n/a	0
Chromosome 6	AP023466.1	n/a	n/a	0
Chromosome 7	AP023467.1	n/a	n/a	0
Chromosome 8	AP023468.1	n/a	n/a	0
Chromosome 9	AP023469.1	n/a	n/a	0
Chromosome 10	AP023470.1	n/a	n/a	0
Chromosome 11	AP023471.1	n/a	n/a	0
Chromosome 12	AP023472.1	n/a	n/a	0
Chromosome 13	AP023473.1	n/a	n/a	0
Chromosome 14	AP023474.1	n/a	n/a	0
Chromosome 15	AP023475.1	n/a	n/a	0
Chromosome 16	AP023476.1	n/a	n/a	0
Chromosome 17	AP023477.1	n/a	n/a	0
Chromosome 18	AP023478.1	n/a	n/a	0
Chromosome 19	AP023479.1	n/a	n/a	0
Chromosome 20	AP023480.1	n/a	n/a	0
Chromosome 21	AP023481.1	n/a	n/a	0
Chromosome 22	AP023482.1	n/a	n/a	0
Chromosome X	AP023483.1	n/a	n/a	0
Chromosome Y	AP023484.1	n/a	n/a	0
unplaced	n/a	n/a	n/a	599

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	3,085,766,330	623	2,834,639,107	141,953,703	471
Chromosome 1	250,749,103	1	218,921,177	250,749,103	34
Chromosome 2	238,414,537	1	233,621,477	238,414,537	30
Chromosome 3	199,042,635	1	195,085,281	199,042,635	15
Chromosome 4	188,746,629	1	185,567,106	188,746,629	20
Chromosome 5	179,802,632	1	175,047,531	179,802,632	26
Chromosome 6	172,123,575	1	168,302,843	172,123,575	15
Chromosome 7	159,271,024	1	152,641,324	159,271,024	39
Chromosome 8	141,953,703	1	141,305,033	141,953,703	11
Chromosome 9	138,979,906	1	108,664,734	138,979,906	9
Chromosome 10	131,944,727	1	128,266,110	131,944,727	18
Chromosome 11	130,646,184	1	130,077,450	130,646,184	15
Chromosome 12	133,680,221	1	130,407,765	133,680,221	13
Chromosome 13	111,916,920	1	95,825,909	111,916,920	7
Chromosome 14	103,333,574	1	87,269,343	103,333,574	5
Chromosome 15	95,537,968	1	77,974,929	95,537,968	19
Chromosome 16	94,690,957	1	73,798,668	94,690,957	24
Chromosome 17	80,688,777	1	76,389,961	80,688,777	22
Chromosome 18	77,846,715	1	74,103,856	77,846,715	10
Chromosome 19	59,105,444	1	55,554,568	59,105,444	13
Chromosome 20	62,398,354	1	59,017,246	62,398,354	7
Chromosome 21	44,550,604	1	33,367,744	44,550,604	7
Chromosome 22	46,684,173	1	33,593,514	46,684,173	12
Chromosome X	153,993,980	1	148,494,798	153,993,980	55
Chromosome Y	50,294,361	1	13,489,449	50,294,361	20
unplaced	39,369,627	599	37,851,291	105,466	25

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ASM1490585v1

See Genome Information for Homo sapiens

Pathogen Detection Resources

There are 1094 assemblies for this organism

History (Show revision history)

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Assembly Unit Name
Primary Assembly
non-nuclear