mChoDid1.alt

Organism name:

Choloepus didactylus (southern two-toed sloth)

Isolate:

mChoDid1

Sex:

male

BioSample:

SAMN12612024

BioProject:

PRJNA561938

Submitter:

Vertebrate Genomes Project

Date:

2020/11/02

Assembly type:

alternate-pseudohaplotype

Assembly level:

Scaffold

Genome representation:

full

GenBank assembly accession:

GCA_015220265.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

JADCNG01

Assembly method:

FALCON v. falcon-2018.31.08-03.06; FALCON-Unzip v. 6.0.0.47841; purge_dups v. github ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b; Scaff10x v. 4.1.0; Bionano Solve v. 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish pbgcpp v. 1.9.0; Longranger Align v. 2.2.2; freebayes v. 1.3.1; gEVAL manual curation v. 2020-09-14; VGP assembly pipeline v. 1.6

Expected final version:

no

Genome coverage:

56.84x

Sequencing technology:

PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS

Linked assembly:

GCA_015220235.1 (principal pseudohaplotype of diploid)

IDs: 8408411 [UID] 22892588 [GenBank]