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LBV11

Organism name:
Anopheles coluzzii (mosquitos)
Isolate:
LBV11
BioSample:
SAMN16754236
BioProject:
PRJNA676011
Submitter:
Institut de Biologia Evolutiva
Date:
2020/12/20
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_016097185.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JADQCX01
Assembly method:
Canu v. 1.8
Expected final version:
yes
Reference guided assembly:
GCA_000005575.1
Genome coverage:
89x
Sequencing technology:
PacBio RS

IDs: 8871901 [UID] 24001898 [GenBank]

See Genome Information for Anopheles coluzzii

There are 12 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length242,999,731
Total ungapped length242,763,231
Gaps between scaffolds0
Number of scaffolds20
Scaffold N5053,712,387
Scaffold L503
Number of contigs2,385
Contig N50217,670
Contig L50312
Total number of chromosomes and plasmids5
Number of component sequences (WGS or clone)20

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_016097245.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome XCM027936.1n/an/a0
Chromosome 2LCM027937.1n/an/a0
Chromosome 2RCM027938.1n/an/a0
Chromosome 3LCM027939.1n/an/a0
Chromosome 3RCM027940.1n/an/a0
unplacedn/an/an/a15

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All242,999,73120242,763,23153,712,3872,3650
Chromosome X29,200,896129,155,89629,200,8964500
Chromosome 2L53,712,387153,661,28753,712,3875110
Chromosome 2R62,277,563162,228,76362,277,5634880
Chromosome 3L42,664,349142,626,04942,664,3493830
Chromosome 3R54,657,607154,604,30754,657,6075330
unplaced486,92915486,929351,78300