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DLA155B

Organism name:
Anopheles coluzzii (mosquitos)
Isolate:
DLA155B
BioSample:
SAMN16754235
BioProject:
PRJNA676011
Submitter:
Institut de Biologia Evolutiva
Date:
2020/12/20
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_016097205.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JADQCY01
Assembly method:
Canu v. 1.8
Expected final version:
yes
Reference guided assembly:
GCA_000005575.1
Genome coverage:
28x
Sequencing technology:
Oxford Nanopore MinION

IDs: 8871871 [UID] 24001868 [GenBank]

See Genome Information for Anopheles coluzzii

There are 12 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length236,561,446
Total ungapped length236,355,746
Gaps between scaffolds0
Number of scaffolds24
Scaffold N5052,031,443
Scaffold L503
Number of contigs2,081
Contig N50329,948
Contig L50188
Total number of chromosomes and plasmids5
Number of component sequences (WGS or clone)24

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_016097255.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome XCM027921.1n/an/a0
Chromosome 2LCM027922.1n/an/a0
Chromosome 2RCM027923.1n/an/a0
Chromosome 3LCM027924.1n/an/a0
Chromosome 3RCM027925.1n/an/a0
unplacedn/an/an/a19

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All236,561,44624236,355,74652,031,4432,0570
Chromosome X26,063,844126,025,14426,063,8443870
Chromosome 2L54,532,976154,486,97654,532,9764600
Chromosome 2R62,439,868162,398,06862,439,8684180
Chromosome 3L41,337,531141,304,73141,337,5313280
Chromosome 3R52,031,443151,985,04352,031,4434640
unplaced155,78419155,78411,75700