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AcolN2

Organism name:
Anopheles coluzzii (mosquitos)
Isolate:
Ngousso colony
Sex:
female
BioSample:
SAMN10528920
BioProject:
PRJNA660041
Submitter:
Virginia Tech
Date:
2021/01/06
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_016508615.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JADFFJ01
Assembly method:
FALCON-Unzip v. Aug-2018
Expected final version:
yes
Genome coverage:
48x
Sequencing technology:
PacBio Sequel

IDs: 9077501 [UID] 24459058 [GenBank]

See Genome Information for Anopheles coluzzii

There are 12 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length245,361,604
Total ungapped length245,348,004
Gaps between scaffolds0
Number of scaffolds82
Scaffold N5048,179,558
Scaffold L503
Number of contigs218
Contig N503,468,756
Contig L5022
Total number of chromosomes and plasmids5
Number of component sequences (WGS or clone)82

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_016508665.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome XCM028293.1n/an/a0
Chromosome 2LCM028294.1n/an/a0
Chromosome 2RCM028295.1n/an/a0
Chromosome 3LCM028296.1n/an/a0
Chromosome 3RCM028297.1n/an/a0
unplacedn/an/an/a77

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All245,361,60482245,348,00448,179,5581360
Chromosome X26,825,347126,823,04726,825,347230
Chromosome 2L48,179,558148,176,65848,179,558290
Chromosome 2R61,076,761161,073,86161,076,761290
Chromosome 3L42,074,947142,072,04742,074,947290
Chromosome 3R53,444,961153,442,36153,444,961260
unplaced13,760,0307713,760,030221,02000