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BGI_Pspa_1.1

Organism name:
Polyodon spathula (Mississippi paddlefish)
Isolate:
Pddl_001
BioSample:
SAMN13737660
BioProject:
PRJNA599026
Submitter:
BGI
Date:
2021/02/26
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_016984195.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAAWVQ01
Assembly method:
SOAPdenovo v. 1.1
Expected final version:
yes
Genome coverage:
130x
Sequencing technology:
Illumina HiSeq

IDs: 9337031 [UID] 25136458 [GenBank]

See Genome Information for Polyodon spathula

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,597,899,125
Total ungapped length1,493,570,301
Gaps between scaffolds0
Number of scaffolds180,085
Scaffold N50240,484
Scaffold L501,905
Number of contigs380,227
Contig N5011,051
Contig L5040,574
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)180,085

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,597,899,125180,0851,493,570,301240,484200,1420