Format

Send to:

Choose Destination

Download Assembly



ECA36_Canu

Organism name:
Caenorhabditis elegans (roundworm)
Infraspecific name:
Strain: ECA36
Sex:
hermaphrodite
BioSample:
SAMN17358465
BioProject:
PRJNA692613
Submitter:
Northwestern University
Date:
2021/02/26
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_016989455.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAFETO01
Assembly method:
Canu v. 1.9
Expected final version:
no
Genome coverage:
200x
Sequencing technology:
PacBio Sequel

IDs: 9323441 [UID] 25141848 [GenBank]

See Genome Information for Caenorhabditis elegans

There are 26 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length105,609,511
Total ungapped length105,609,511
Number of contigs80
Contig N502,836,169
Contig L5012
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)80

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced105,595,72479105,595,7242,836,16900
MoleculeSequence RoleTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds13,787013,78710113,787013,78713,787013,787000000
Support Center