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ASM1867685v1

Organism name:
Candidatus Woesearchaeota archaeon (archaea)
Taxonomy check:
Inconclusive
Isolate:
SI037_bin144
BioSample:
SAMN14914064
BioProject:
PRJNA630981
Submitter:
The University of Melbourne
Date:
2021/06/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_018676855.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JABHDY01
Assembly method:
MEGAHIT v. 1.2.8
Expected final version:
yes
Genome coverage:
Not Applicable
Sequencing technology:
Illumina HiSeq 2000

IDs: 10204161 [UID] 27146338 [GenBank]

See Genome Information for Candidatus Woesearchaeota archaeon

There are 710 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI
Annotation Date::05/19/2020 07:26:50
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.11
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::1,021
CDSs (total)::986
Genes (coding)::978
CDSs (with protein)::978
Genes (RNA)::35
rRNAs::1, 1 (5S, 16S)
complete rRNAs::1 (5S)
partial rRNAs::1 (16S)
tRNAs::31
ncRNAs::2
Pseudo Genes (total)::8
CDSs (without protein)::8
Pseudo Genes (ambiguous residues)::0 of 8
Pseudo Genes (frameshifted)::0 of 8
Pseudo Genes (incomplete)::6 of 8
Pseudo Genes (internal stop)::2 of 8
##Genome-Annotation-Data-END##

Global statistics

Total sequence length943,853
Total ungapped length943,853
Number of contigs4
Contig N50704,354
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced943,8534943,853704,35400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Woesearchaeota archaeonCandidatus Woesearchaeota archaeon

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana