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ASM1909598v1

Organism name:
Streblospio benedicti (segmented worms)
Isolate:
BayGN2011
Sex:
female
BioSample:
SAMN18729079
BioProject:
PRJNA721660
Submitter:
North Carolina State University
Date:
2021/07/06
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_019095985.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAGTTF01
Assembly method:
Racon v. 2019; HiRise v. 2019
Expected final version:
yes
Genome coverage:
350.0x
Sequencing technology:
Oxford Nanopore; Illumina; Hi-C; Chicago Proximity Ligation

IDs: 10439581 [UID] 27721078 [GenBank]

See Genome Information for Streblospio benedicti

History (Show revision history)

Comment

Global statistics

Total sequence length701,453,095
Total ungapped length699,289,695
Gaps between scaffolds0
Number of scaffolds6,112
Scaffold N5056,106,436
Scaffold L506
Number of contigs27,746
Contig N5048,523
Contig L503,800
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)6,112

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_019096005.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM032659.1n/an/a0
Chromosome 2CM032660.1n/an/a0
Chromosome 3CM032661.1n/an/a0
Chromosome 4CM032662.1n/an/a0
Chromosome 5CM032663.1n/an/a0
Chromosome 6CM032664.1n/an/a0
Chromosome 7CM032665.1n/an/a0
Chromosome 8CM032666.1n/an/a0
Chromosome 9CM032667.1n/an/a0
Chromosome 10CM032668.1n/an/a0
Chromosome 11CM032669.1n/an/a0
unplacedn/an/an/a6,101

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All701,453,0956,112699,289,69556,106,43621,6340
Chromosome 138,144,258138,012,35838,144,2581,3190
Chromosome 262,617,905162,423,40562,617,9051,9450
Chromosome 347,249,188147,103,38847,249,1881,4580
Chromosome 453,936,116153,772,71653,936,1161,6340
Chromosome 556,106,436155,941,13656,106,4361,6530
Chromosome 664,869,143164,687,24364,869,1431,8190
Chromosome 746,050,508145,920,80846,050,5081,2970
Chromosome 864,793,121164,598,92164,793,1211,9420
Chromosome 961,616,311161,439,91161,616,3111,7640
Chromosome 1043,752,111143,609,01143,752,1111,4310
Chromosome 1161,373,471161,168,47161,373,4712,0500
unplaced100,944,5276,101100,612,32730,0713,3220