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ZF1_MM_RP

Organism name:
Danio rerio (zebrafish)
Infraspecific name:
Strain: SAT
Sex:
pooled male and female
BioSample:
SAMN20449209
BioProject:
PRJNA750350
Submitter:
University of Kentucky
Date:
2021/09/20
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_020064045.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAIHOL01
Assembly method:
Miniasm v. 0.3
Expected final version:
yes
Genome coverage:
30.0x
Sequencing technology:
Nanopore long-read sequencing; Illumina

IDs: 10945971 [UID] 28942348 [GenBank]

See Genome Information for Danio rerio

There are 18 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,419,341,486
Total ungapped length1,419,341,486
Number of contigs1,117
Contig N503,106,778
Contig L50133
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,117

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,419,341,4861,1171,419,341,4863,106,77800