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MU_Atrans_1.0

Organism name:
Acipenser transmontanus (white sturgeon)
Infraspecific name:
Strain: batch67_ind68
BioSample:
SAMN20849129
BioProject:
PRJNA755998
Submitter:
canseq150
Date:
2021/09/23
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_020113195.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAIUCX01
Assembly method:
w2rap-contigger v. 2020-12; ARCS/LINKS v. 2020-12
Expected final version:
yes
Genome coverage:
30.0x
Sequencing technology:
Illumina HiSeq

IDs: 10983841 [UID] 29008328 [GenBank]

See Genome Information for Acipenser transmontanus

History (Show revision history)

Comment

Global statistics

Total sequence length860,366,165
Total ungapped length859,798,566
Gaps between scaffolds0
Number of scaffolds359,947
Scaffold N502,601
Scaffold L5080,667
Number of contigs366,122
Contig N502,596
Contig L5086,845
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)359,947

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced860,366,165359,947859,798,5662,6016,1750