U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



UMN_Dpol_1.0

Organism name:
Dreissena polymorpha (zebra mussel)
Isolate:
Duluth1
Sex:
male
BioSample:
SAMN11444935
BioProject:
PRJNA533175
Submitter:
University of Minnesota
Date:
2021/10/21
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_020536995.1 (latest)
RefSeq assembly accession:
GCF_020536995.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAIWYP01
Assembly method:
Canu v. 1.7
Expected final version:
yes
Genome coverage:
93.0x
Sequencing technology:
PacBio Sequel; Illumina HiSeq

IDs: 11314711 [UID] 29806578 [GenBank] 37518608 [RefSeq]

See Genome Information for Dreissena polymorpha

Pathogen Detection Resources

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,797,942,340
Total ungapped length1,797,675,540
Gaps between scaffolds0
Number of scaffolds193
Scaffold N50117,515,028
Scaffold L506
Number of contigs2,861
Contig N501,111,654
Contig L50444
Total number of chromosomes and plasmids16
Number of component sequences (WGS or clone)193

Supplemental Content

Access the data

Assembly Information

Related Information

PubMed articles for this assembly

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_020537005.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM035915.1=NC_068355.10
Chromosome 2CM035916.1=NC_068356.10
Chromosome 3CM035917.1=NC_068357.10
Chromosome 4CM035918.1=NC_068358.10
Chromosome 5CM035919.1=NC_068359.10
Chromosome 6CM035920.1=NC_068360.10
Chromosome 7CM035921.1=NC_068361.10
Chromosome 8CM035922.1=NC_068362.10
Chromosome 9CM035923.1=NC_068363.10
Chromosome 10CM035924.1=NC_068364.10
Chromosome 11CM035925.1=NC_068365.10
Chromosome 12CM035926.1=NC_068366.10
Chromosome 13CM035927.1=NC_068367.10
Chromosome 14CM035928.1=NC_068368.10
Chromosome 15CM035929.1=NC_068369.10
Chromosome 16CM035930.1=NC_068370.10
unplacedn/an/an/a177

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All1,797,942,3401931,797,675,540117,515,0282,6680
Chromosome 1211,287,8781211,260,178211,287,8782770
Chromosome 2155,660,2061155,637,506155,660,2062270
Chromosome 3152,547,6821152,527,682152,547,6822000
Chromosome 4145,370,4541145,351,254145,370,4541920
Chromosome 5127,705,0401127,684,040127,705,0402100
Chromosome 6117,515,0281117,494,328117,515,0282070
Chromosome 7111,411,2371111,391,737111,411,2371950
Chromosome 8107,691,9331107,676,033107,691,9331590
Chromosome 9106,873,6261106,856,226106,873,6261740
Chromosome 1090,528,778190,514,37890,528,7781440
Chromosome 1187,507,468187,493,36887,507,4681410
Chromosome 1277,012,831176,999,83177,012,8311300
Chromosome 1375,790,364175,778,46475,790,3641190
Chromosome 1475,447,393175,434,39375,447,3931300
Chromosome 1566,979,997166,969,99766,979,9971000
Chromosome 1651,057,412151,051,11251,057,412630
unplaced37,555,01317737,555,013422,30400